Geobacillus thermodenitrificans: GTNG_0016
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Entry
GTNG_0016 CDS
T00496
Symbol
dnaZX
Name
(GenBank) DnaZX
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gtn
Geobacillus thermodenitrificans
Pathway
gtn03030
DNA replication
gtn03430
Mismatch repair
gtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTNG_0016 (dnaZX)
03430 Mismatch repair
GTNG_0016 (dnaZX)
03440 Homologous recombination
GTNG_0016 (dnaZX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtn03032
]
GTNG_0016 (dnaZX)
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_0016 (dnaZX)
Enzymes [BR:
gtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTNG_0016 (dnaZX)
DNA replication proteins [BR:
gtn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GTNG_0016 (dnaZX)
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GTNG_0016 (dnaZX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
TIP49
AAA_22
RCF1-5-like_lid
AAA_16
AAA_assoc_2
DnaX_C
AAA_19
AAA_5
Rad17
AAA_7
AAA_14
DUF815
PIF1
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ABO65403
LinkDB
All DBs
Position
25688..27367
Genome browser
AA seq
559 aa
AA seq
DB search
MAYQALYRVFRPQRFADMVGQEHVTKTLQSALLQHKISHAYLFSGPRGTGKTSAAKIFAK
AVNCEHAPAAEPCNECPVCLGITNGTVPDVLEIDAASNNRVDEIRDIREKVKFAPTSVRY
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPATIISRCQRFDFRRIPL
SAIVSRLKYVANAQGVEASDEALSAIARAADGGMRDALSLLDQAISFSNGKLEVDDVLSM
TGAASFAALADFIGAIYRKDTAAVLQQFETMMAQGKDPNRLVEDLILYCRDLLLYKTAPH
VEGAIQIAVVDEAFISLSETIPLSDLYGAIELLNKSQQEMKWTNHPRLLLEVALVRLCHQ
PAAAPSLSASELEPLVKRIETLEAELRRLKEQPSASPSAAAPAKKTTKVAKTGGYKAPVG
RIHELLKQATHEDLALIKGRWADVLDTLKRQHKVSHAALLQESEPVAASASAFVLKFKYE
IHCKMATDPASSVKENVEAILFEMTNRRFEMVAIPEEEWGKIREDFIRNKEAKAEKSEEE
PLIAEAKRLFGEELIEIKE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggcataccaagcgttataccgtgttttccggccgcagcgttttgccgacatggtcggc
caagaacacgtaacgaaaacattgcaaagcgccctgcttcaacataaaatatcgcatgct
tacttattttccggtccacgtgggacgggaaaaacgagtgcggcgaaaattttcgccaag
gcggtcaattgtgaacatgctccggcggccgagccgtgcaatgaatgtcccgtttgtctc
ggcattacgaacggaacggttcccgatgtgttggaaattgacgccgcttccaacaaccgt
gtcgatgaaattcgcgacatccgcgagaaagtaaagtttgcaccgacttcggtccgctat
aaagtgtacattattgatgaagtacacatgctatcgatcggcgcgtttaacgcactgctg
aaaacgttagaagagccgccgaaacacgtcattttcattttggccacgaccgagccgcat
aaaattccggcaacaattatttcccgttgtcaacggttcgactttcgccgcattccgcta
tcggccatcgtttcccggctgaaatacgtagcgaatgcccaaggtgtggaagcatctgat
gaggcgctgtcagccattgcccgtgccgccgatggggggatgcgcgatgcgctcagttta
cttgatcaagcgatttcgtttagcaatgggaagcttgaggtcgacgatgtgctgtcgatg
acgggggcggcgtcatttgctgcattagccgacttcattggagctatctaccgcaaagat
acagctgcggttcttcagcagttcgaaacaatgatggctcaggggaaagaccccaatcgt
ttggtggaagatttaattttatattgtcgcgacttgctgctctacaaaaccgcccctcat
gtggaaggagccattcaaattgcagtcgtcgatgaggcgtttatctcgctttcggaaacg
attcctctttctgatttatacggagcgattgagctgttgaacaaaagtcagcaagagatg
aaatggacgaaccacccacgtctccttttggaagtagcgctcgttaggctttgccatcag
ccggctgccgcgccgtcgttatccgcttccgagctggagccgttagtgaagcggattgag
acgttagaagccgaactgcgccgtctgaaggaacaaccgtccgcttccccatcggccgcc
gctccggcgaaaaaaacgacgaaagtggcgaaaaccgggggatataaagcgccagttggc
cgcattcatgaactgttgaagcaagcgacgcacgaagatttagccttaattaaaggccgc
tgggcggacgtacttgatacgttgaaacggcagcataaagtgtcgcacgccgccttgctt
caagagagcgagccggttgcagcaagcgcctcggcatttgtgttaaagtttaagtatgaa
atccactgcaaaatggcgacggatccggcgagctcagtgaaagaaaatgttgaggcgatt
ttgttcgaaatgacgaatcggcgatttgaaatggtcgccattccggaagaagaatgggga
aaaataagggaagattttatccgtaacaaagaggctaaagcagaaaaaagtgaggaagaa
ccgttgattgccgaggcgaaacggctgtttggtgaagaactgatcgaaattaaagaataa
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integrated database retrieval system
