Geobacillus thermodenitrificans: GTNG_0131
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Entry
GTNG_0131 CDS
T00496
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gtn
Geobacillus thermodenitrificans
Pathway
gtn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GTNG_0131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtn03021
]
GTNG_0131
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_0131
Enzymes [BR:
gtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GTNG_0131
Transcription machinery [BR:
gtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GTNG_0131
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GTNG_0131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABO65518
UniProt:
A4IJL4
LinkDB
All DBs
Position
138885..139829
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELSEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIEGVVEDVTAIILNVKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLHIATLAEGGRLRMRMTARRGRGYVPAEANKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVTDYDKLTIDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EDDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVK
AKLAELGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccgaaaattgaaacggtcgaactgagcgaagatgccaaatac
ggcaaattcgtggtcgaaccgctcgagcgcggatatggaacaaccttagggaactccttg
cgtcgtatcctattgtcttcactccctggtgcggctgtgacatcggtgcaaatcgacggt
gtactgcacgagttttcaacgattgaaggcgtcgtcgaggatgtaacagccatcattctg
aatgtcaaaaagttagcgttgaaaatttactcggacgaagagaaaacgttggaaatcgat
gtgcagggtgaaggagttgtcacggctgccgatattactcacgacagcgatgtagaaatt
ttaaacccggaccttcatattgctacgctggcggaaggtggtcgcttgcgcatgcgcatg
accgccagacgggggcgtgggtatgtaccggctgaggcgaacaagcgtgaagatcagcca
atcggcgtgattccgatcgactccatttatacgcctgtctcccgagtttcctatcaagtt
gagaacacgcgggtcggtcaggtgacagactatgacaaattgacgattgacgtgtggacc
gatggaagcatcgggccgaaagaggccatttcccttggggcgaaaattttaactgagcac
ttgaacatttttgtcggcctgacggatgaagcacaaaatgctgagatcatggtagaaaaa
gaggacgaccaaaaagaaaaagtgctcgaaatgacgatcgaggaactcgatctttctgtc
cgttcctacaactgcttaaaacgtgccggcatcaacaccgttcaagagctgacgcaaaaa
acggaagaagatatgatgaaagtgcgcaacctcggccgcaaatcgcttgaagaagtgaag
gcgaagctggccgagctggggcttagcctgcgtaaagacgattaa
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