Geobacillus thermodenitrificans: GTNG_0201
Help
Entry
GTNG_0201 CDS
T00496
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gtn
Geobacillus thermodenitrificans
Pathway
gtn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTNG_0201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtn03019
]
GTNG_0201
03009 Ribosome biogenesis [BR:
gtn03009
]
GTNG_0201
Enzymes [BR:
gtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GTNG_0201
Messenger RNA biogenesis [BR:
gtn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GTNG_0201
Ribosome biogenesis [BR:
gtn03009
]
Prokaryotic type
rRNA helicases
GTNG_0201
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
CMS1
DD_DDX21-DDX50
AAA_19
NAT10_TcmA_helicase
HTH_CLF_N
Motif
Other DBs
NCBI-ProteinID:
ABO65585
UniProt:
A4IJT1
LinkDB
All DBs
Position
215058..216461
Genome browser
AA seq
467 aa
AA seq
DB search
MTTFQELGLSKEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI
VEKVDVKNGVIQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKH
PHVIVGTPGRIIDHINRGTLRLEHVRTVVLDEADEMLNMGFIEDIEAILRHVPTERQTLL
FSATMPDPIRRIAERFMNDPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAP
ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTK
RKMERMKPPTLNEALEGQQRIAIEKLLNVAEAENLSFYKRAAEELLEEHDSVTIVAACLK
MLTREPDTTPVKLTEEPPLAVKREKKRGSRPDSSARGRTKKRRITAH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacatttcaagaattaggattaagtaaagaggtaatgaaagctatcgagcggatg
gggtttgaagaaacgaccccaattcaagcaaaaacgatcccgctcagcctacaaaataaa
gatgtgatcggccaagcgcagaccggaacggggaaaaccgctgcatttggcatcccgatc
gtagaaaaagtggatgtgaaaaacggtgtcattcaggcgctcgtcgtcgcaccgacacgt
gagctcgccattcaagtgtcggaagaactgtataaaatcggtgcggtcaagcgggtgcgt
gttttaccgatttacggcggtcaagatattgagcggcaaattcgcgccttgaaaaaacat
ccgcacgtcatcgtcggcacaccaggccgcatcatcgaccatattaaccgcgggacactc
cgcctcgaacatgtgcgtacggtcgttctcgatgaggccgatgaaatgttgaatatgggc
tttattgaagatattgaggcgattttacgtcatgtgccgactgagcggcagacgctgttg
ttctctgcgacgatgccggatccgatccgccgcattgccgagcggtttatgaatgatccg
gaactcgtcaaagtgaaggcgaaggaaatgaccgtgccgaatattcagcaatattatttg
gaagtgcacgagaaaaagaaatttgacattttgacacggcttcttgatatccaggcgccg
gagctggcgattgtgtttggccgcacgaagcggcgtgtcgacgagctcgctgaagcgctc
aacttgcgtggctatgcagcggaaggcatccatggcgatttgagccaggcgaagcggctg
tcggtgttgcgcaagtttaaagaaggatcgatcgaaattttagttgccaccgacgtcgca
gcgcgcggattagatatttccggtgtgacgcacgtatataattttgacattccgcaagac
ccagaaagctacgtccatcgaatcggccgcacggggcgcgccggtaagacaggggtggcg
atgacgtttgtgacaccgcgggaaattggccagcttcatcatattgagcggacgacgaag
cggaagatggagcggatgaagccgccgacactcaatgaggcgcttgaaggccagcagcgc
atcgccattgaaaagctcctcaatgtcgcggaagcggaaaacttatcattttacaagcgg
gcggccgaggagttgcttgaagagcatgactcagtgacgatcgtcgccgcctgcctgaaa
atgttgacgcgcgagccagacacgacaccggtgaagttgacggaagaaccgcctctagca
gtcaaacgggagaaaaagcggggcagccgcccggacagttcggcgcgtggtcggacgaaa
aaacggcggattacggcgcattaa
DBGET
integrated database retrieval system
