Geobacillus thermodenitrificans: GTNG_0557
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Entry
GTNG_0557 CDS
T00496
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtn03019
]
GTNG_0557
Messenger RNA biogenesis [BR:
gtn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GTNG_0557
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABO65939
UniProt:
A4IKT5
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All DBs
Position
618958..619938
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AA seq
326 aa
AA seq
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MAKGIIHYEVGEQVDLFLLIKSATKGIASNGKPFLTLILQDKSGDIEAKLWDVSPDDEER
YAPECIVKVVGDIHNYRGKLQLRIRSIRPAHPSEAVRVDDFLETAPLTREEMKAKVMDYI
FSMENPNIQRITRYLLKKYETPFFEYPAATKNHHEFISGLAYHVVSMLELAEALVRLYPS
LNKDLLYAGIILHDLGKVIELSGPVSAVYTLEGNLLGHISIMGQAKLARAAEQLGIQGEE
VVILQHLVLSHHGKAEWGSPKPPLVKEAEVLHYIDNLDAKMNMIDRALEKVKPGEFTERI
FALDNRSFYKPAFLAVSAPKTAGNEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaggcattattcattatgaagtcggggaacaagtcgatttgtttttgctcatt
aaatcagcaaccaaaggcattgccagcaacggcaagccgtttttaacattaattttacaa
gataaaagcggcgacattgaagcaaagctgtgggatgtgtctcctgacgatgaggaacgg
tacgcgccggaatgcattgtcaaagtggtcggtgatattcataattaccgcggcaaactg
cagcttcgcatccgctcgatccgccccgcccatccgagcgaagcggtgcgtgttgatgat
tttttagagactgctccgcttactcgtgaggaaatgaaggcgaaagtgatggattacata
ttttccatggaaaatccaaatattcagcgcattacgcgttatttgctaaaaaaatatgaa
acgccgttttttgagtatccggcagcgacgaaaaaccatcatgaatttatttccggactg
gcgtatcacgtcgtctctatgctcgaactcgctgaggcgctcgttcgcttgtatccgtcg
ctcaataaagacttgctttatgccggcattattttgcatgaccttggcaaagtgatcgaa
ctgtccggcccagtatcggcggtgtatacgcttgaaggcaatttgctcggtcatatttca
atcatgggtcaggcgaaattagcaagggcggctgaacagctcggcattcaaggcgaagag
gtcgtcattttgcaacatctcgtgttgtcgcaccacggaaaagcggagtggggcagcccg
aagccgccgcttgtcaaagaggcggaagtgcttcattatattgataatttagatgcgaag
atgaatatgatcgaccgtgcactggaaaaagtgaagccaggcgagtttaccgagcgcatt
tttgcccttgacaaccgttcattttacaagccggcgtttttggctgtttcagcgccaaag
acagcgggtaatgagaaatag
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