Geobacillus thermodenitrificans: GTNG_0589
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Entry
GTNG_0589 CDS
T00496
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_0589
Enzymes [BR:
gtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GTNG_0589
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GTNG_0589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
ResIII
AAA_16
AAA_12
WDR47_COR
Motif
Other DBs
NCBI-ProteinID:
ABO65971
UniProt:
A4IKW7
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All DBs
Position
652988..656716
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AA seq
1242 aa
AA seq
DB search
MNATFRPKPAGSRWTDEQWKAIAAGGRDILVAAAAGSGKTAVLVERIIQKVTAEEGAVDI
DRLLVVTFTNAAAAEMKARIGEALERELANRPHSLHLRRQLSLLNRASISTLHSFCLDVI
RKYYYLLDLDPSFRIADETEIELLKEDVLEELLEEEYGKADNERFFAVVDAYTGDRSDAE
LQEMILALYEFSRSHPAPDEWLADLVSMYDVDEQTNVETLPPARYIAQHAAMELAAAKRF
IGLALALAEKESGPKPYEKRLREDMDLIADLERRLSGSWDELYHALQSLSFGRLPPCRGD
GFDAELIDEAKSLRDQAKKKIEALRDNVFSLHPSAWLRHMREMKPVVETIAALVRRFSAM
FEAAKREKGIVDFSDLEHYCLRILRQYDPETGEWQPSSAALEYQAQFDEVLVDEYQDTNL
VQETILQLVKKGSERTGNLFMVGDVKQSIYRFRLAEPMLFLDKYKRFTADGEAGGMKIDL
ASNFRSRAEVLDGTNFLFAQIMGEAVGEMVYDEAAQLKYGADYPEGTDAVPEVMIIDRQR
TSEEDEEETAELEAAELESRLMAEKIKEIVSRPFYVYDRSSGQQRRAMYRDIVVLVRSMT
NAPQMIEQLQAQGIPAAADLSSGYFQATEISVMLSLLKVIDNPYQDIPLAAVLRSPLFRF
DENELAMIRLSDPKGTFFEALQAFCQKTAETGEEENAKEKAISFLNKLEEWRTMARRRSL
ADLIWQLYRDTQFYDFVGALPGGKQRQANLRALYDRARQYESTSFRGLFRFLRFIERLQE
RGDDLGAARPLGDQEDVVRVMTIHSSKGLEFPIVFLVGLARPFYTRDLHSPYLLDKELGF
AARFVHPRLRISYPTLPLLAIQVKKRLELLAEEMRILYVALTRAKEKLYLLASVNDADKE
IEKWKGVAAESGWLLPDDVRASARSYLDWIGRALIRHRDGRSLVEVNRPDEIASHPSVWR
FEIVSAAKLRNAEVSTDREDGGALVALEQGRPVPTQGEWEEEARRRLLWRYRYGKETVVR
AKQSVSELKEQQALFGEQADEWLPRKGTAPLFSRPRFMQEKTLTPAEKGTALHVVMRHLD
LHAPMDESSIRSQIIRLVEKELLSAEQAETVDAAAIVAFFATDIGRRLCAAREVYREVPF
SLGLPADELYGSEGMESGRRLLVQGVVDCVFADERGYVVIDYKTDEVTGRFAGQKEEATR
FLLGRYGGQMRLYRRAIEQIWRVPVAECYLYSFDGEYFLAVE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacgtttcgcccgaagcccgctggaagtcggtggacggatgaacaatggaag
gcgattgcagccggcggccgggatattctcgtcgctgcggcggccggatcgggaaaaacg
gctgttctcgtcgagcgaattattcaaaaggtgacggcggaagaaggggcggtcgatatc
gatcgcctgctcgtcgtcacgtttacgaatgcggcagcggccgaaatgaaagcgaggatt
ggcgaagcgcttgaacgggagcttgccaatcggccgcattcgctccatttgcggcgtcaa
ctcagtttgctcaaccgcgcttcgatttcgacgctccattcgttttgtttggatgtgatc
cgcaagtattattatttgctcgatttggacccgtcgttccgcattgccgatgagacggaa
atcgagctgttgaaagaagatgtccttgaggaactgcttgaggaggaatacgggaaggcg
gacaatgagcgctttttcgctgttgtcgatgcctataccggtgaccgcagtgacgcggag
ctgcaggagatgattttggcgctttacgaattctcccgttcccatccggcaccggacgaa
tggttggccgatttagtatcgatgtatgatgtcgatgaacaaacgaatgtcgagacgctg
ccaccggcacgctatatcgcccaacacgcagcgatggagttggcggcggctaagcggttt
atcggcttggctttggcgcttgccgagaaagaaagcgggccaaagccgtacgagaagcgg
ctgcgcgaagatatggacttaatcgctgatttggaaagacggctgtccgggtcgtgggat
gagctatatcatgcgttgcaatcgctgtcgtttggtcgtcttcctccttgccgcggcgac
ggatttgacgcagaactcatcgatgaagcgaaatcgttgcgtgatcaggcgaagaagaaa
atcgaagcactgcgcgacaacgtgttttcgctccatccatccgcctggcttcgccacatg
cgtgagatgaagccggtcgtcgaaacgatcgccgctcttgtccgccgtttttccgccatg
tttgaagcagcgaaacgggagaaagggatcgtcgatttttccgacttagagcattactgt
ttgcgcattttgcggcagtacgatccggaaactggcgaatggcagccgtcatccgcggct
ttggaataccaggcacagtttgatgaagtactcgttgatgaatatcaagatacgaacctt
gtccaagaaacgattttgcagctcgtcaaaaaaggaagcgagcgaacgggcaacttgttt
atggttggcgatgtcaagcagtcgatttaccgattccgcctcgctgagccgatgctgttt
cttgataagtacaaacggtttaccgctgatggagaagcaggaggaatgaaaatcgacttg
gcgagcaacttccgtagccgtgctgaggtgcttgatggaacgaattttttatttgcacaa
atcatgggggaagcggtcggggaaatggtttacgatgaggcggcgcagctcaagtacggc
gccgattatccggagggaacggatgccgttccggaagtgatgatcatcgatcggcagcgt
acgtcggaagaggacgaagaggaaacagccgaacttgaggcggccgagcttgagtcgcgt
ttgatggcggaaaaaattaaagagatcgtttcccgcccgttttatgtgtatgaccgctca
agtggacaacagcggcgcgccatgtatcgcgatatcgttgtgctcgtccgttcgatgaca
aatgcgccgcaaatgattgaacagctgcaggcgcagggcattccggccgccgctgattta
tcatctggttattttcaggcgacggaaatttcggttatgttgtcgctgttgaaagtgatc
gacaacccgtatcaagatattccgctagcggctgtgcttcgctcaccactattccggttt
gatgaaaatgagcttgctatgatccgcctcagcgacccaaaaggcacgtttttcgaggcg
ttgcaagcgttttgtcaaaaaacagcagaaacgggtgaggaagagaacgctaaggaaaaa
gcgatttcctttctcaacaagttggaagaatggcgtacgatggcgcgccgccgttcatta
gcggatctgatttggcagctgtatcgagacacacaattttatgattttgttggcgctttg
ccgggcggaaagcagcggcaagccaatttgcgcgccttgtatgatcgcgcccggcaatat
gaatcgacgtcatttcgagggctgttccgctttctccgcttcattgaacggctgcaagag
cgcggcgatgacttgggggcggcccgtccgcttggcgatcaggaagatgtcgtgcgcgtc
atgacgatccatagcagcaaaggactcgaatttccgatcgtttttcttgttggacttgcc
cgcccgttttatacgcgcgacttgcattccccgtatttgcttgataaagagctcggtttt
gccgcccggtttgtccatccgcggctgcgcatcagctatccgacgctgccgctgttggcc
attcaagtgaaaaagcggcttgagctgcttgccgaggaaatgcgcattttgtacgtcgcg
ctcacaagagcgaaagagaagctgtacttgcttgcttccgtcaacgatgcggataaggag
attgaaaaatggaaaggggtagctgctgaaagcggttggctccttcctgacgatgtgcgt
gcatcagcccgctcgtacttagattggatcggtcgagcgctcatccgccatcgagacggg
cgttctttagtcgaggtgaatcggccggacgaaattgcttcccatccgtcggtgtggcgt
tttgagatcgtgtcggcggccaaacttcgcaacgctgaggtatcaaccgatcgggaggat
ggcggcgcgcttgttgcgctcgaacaaggccgccctgttccaactcaaggggaatgggaa
gaggaagcaaggcggcgcttattgtggcggtatcgctacggcaaggagacggtcgtgcgc
gctaagcagtcagtctcagaactgaaagaacagcaggcgttatttggcgaacaggcggac
gaatggctgccgcgcaaagggacggcaccgctgttctcccggccgcgttttatgcaggaa
aaaacgttgacaccggccgaaaaaggaactgcgcttcatgtggtcatgcgccatctcgac
ttgcacgcaccgatggacgaatcgtcaatccgcagccaaatcattcggcttgtggaaaaa
gaattgctgtcggctgagcaagcggaaacggtcgatgccgccgcgatcgtcgcctttttc
gccacggacatcggccgccgtctttgcgccgcccgcgaagtataccgagaagtgccgttc
agcttagggcttccggctgacgagctatacggcagcgaagggatggagagcggccgccgc
ctgctcgtgcaaggggtggtcgattgcgtgtttgccgatgaacgcggttatgtggtgatc
gactataagacggatgaggtgacgggccgttttgccggccaaaaagaggaggcgacccgc
tttttgcttggtcgttacgggggacaaatgcgcctctaccggcgggccattgaacaaatt
tggcgcgtgccggtggcggaatgttacttatattcgtttgacggtgaatattttcttgca
gtggagtga
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