Geobacillus thermodenitrificans: GTNG_0590
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Entry
GTNG_0590 CDS
T00496
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD-like protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_0590 (sbcD)
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GTNG_0590 (sbcD)
Archaeal homologous recombinant proteins
GTNG_0590 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
ABO65972
UniProt:
A4IKW8
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All DBs
Position
656734..657912
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AA seq
392 aa
AA seq
DB search
MRILHTADWHLGRTLEGRSRLAEQEAFIDELIEIVEKEQIDAILMAGDVFDSVNPPAAAE
QLFYESLARLSDKGRRPVAVISGNHDHPDRISAARTLLSDYHIFLFGRPEASVCRIDVPS
CGETMMLAPLAYPSESRLAELLSSDHREAVLRDRYDDRIRALLEMMAASFTEKTVNIVMS
HLYVAGGRTSDSERPIEVGGAYTVAATSLPKAAQYVALGHLHRPQDVKRAETAARYSGSP
LAYSFSEAGHAKSVTVVDVHPGGAASVTEIPLAAGKPLVRWKATEGLAQVYRWCEEGKDQ
SCWVDLELHVTEPLTMEEIYRLRKLHPGFVYIRPVFPQRVEEEAEVSREALSLEEMFCRF
YKRQTGGQTPDEELVRLFLELAAEEEQEGGEE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttgcatacggcggactggcatctcgggcgaacactcgagggtcgaagccgg
ttggctgagcaggaggcgtttatcgatgagctcatcgaaattgtcgagaaagaacaaatt
gacgccattttaatggccggtgatgtatttgattccgtcaatccgccggcggcggcggaa
caattgttttacgaaagtttagcccgcctgtccgacaagggacggcggccagtcgccgtc
atcagtggaaatcatgaccatccggaccgcatcagcgccgcccggacgttgctttccgat
tatcatatttttctgttcggccgtccggaagcttccgtttgccgaattgatgtcccctca
tgcggggagacgatgatgcttgctccgttggcctatccgtccgaatcgcgccttgctgag
ctgctgtcgtctgatcatcgggaagcggtgcttcgtgaccgttatgatgaccgcatccgt
gcactgttagagatgatggccgcttcattcactgaaaagacggtcaatatagtgatgagc
catctttatgtcgccggcggccgtacgtccgattctgagcggccgattgaagtaggtggc
gcctatacagtggcggcgacgagtttgccgaaagccgcccaatatgtggcgctcggtcat
ctacaccggccgcaggacgtcaaacgggcggagacggcagcacgctattccggttcaccg
ctcgcttatagcttttccgaagctgggcatgccaaatcggtcacggtcgttgatgtgcac
ccgggcggggcggctagcgtgacggaaattccgcttgccgccggcaagccgctcgtccgt
tggaaggcgacagaagggctcgcccaagtgtaccgttggtgcgaggaaggaaaagaccag
tcgtgctgggttgatttggagctccatgtgactgagccgttaacaatggaagaaatttac
cggttgcgcaagcttcatccaggttttgtttatatccgtccggtgtttccccaacgggtg
gaagaagaggctgaagtgagccgcgaggcgctctcgcttgaagagatgttctgccgtttt
tacaaacggcaaacagggggacagacgccggatgaagagctcgtccgcctttttttagag
ctggcggcggaagaagagcaggaggggggagaggagtga
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