Geobacillus thermodenitrificans: GTNG_0591
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Entry
GTNG_0591 CDS
T00496
Symbol
yirY
Name
(GenBank) YirY
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_0591 (yirY)
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GTNG_0591 (yirY)
Archaeal homologous recombinant proteins
GTNG_0591 (yirY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_15
ABC_tran
AAA_21
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ABO65973
UniProt:
A4IKW9
LinkDB
All DBs
Position
657909..661253
Genome browser
AA seq
1114 aa
AA seq
DB search
MKPISLTIAGLHSFREKQTIDFTVLCDGGVFGIFGPTGSGKSTILDAITLALFGSVERAA
NRTQAIINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEWRTRSAVCRLIEHQPEPV
VLADKLSDVDKAIGQLLGLTMEDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFHLERYG
DQLNKKLKDRLIAAEQEEEKIEAEKAGLGDASKAALEQAETEERELAALLAKRKKELEEV
EANVERTKQLWVWQQEKETIERELAELRRHEPDIRALEVKKERAEQAERIWPYWEQYEQA
RRSQIAALKRYEELARKLETAKASHEEAVRRYEQARLEKARREPELLAQTERLRQAEQLE
RQMETIKRELAALDEEHNRLAVREKAAQRQFEEASAWYERGMKRQQELKEELQRYTEALA
RKDEVERAHGEKRQIEQAASAVARVDAQLRQKEEVWRQAEEERIKRERQAAVAGARLHQL
FRLVEKTYHSVCERQQDIEKRLYALQQDIEAERERIEEARTAELAAVLAERLRPGEPCPV
CGSREHPHPSTKPYSTGQGRLPDLEQERRQCEQDLQTLFSLKAQLEQLAGLAAGHGVPPV
FTEGRPTEEVSDVFVEVRALQQDIIEQKESVYRALAQWNEAEAARREAENACRWAAADME
ALQAERRRLEEERQRLEQHWRQTYPSFSLETIDIVYEQLREQEKKWRDVQKRLEDSVPFL
EEKQRAKEKAAEEQRRIETERVRLDSLISTKQQLWEEYERQRREKAGPNPAAQQLREAES
EWRRLQNDEQQAYDEWQRVQKVYQTLESETKVAKQAVEEGARREEEALARWRLVLADTTF
ADAEEAERAKATKEQCSEWDEAIRRYWRQVEQAEHRRAQLSAALGEEAVSAEQWEMLQRV
YAELKAEMETMTQQLGAVQGKVAELRKKHARFVELEAKQTQLSRQIERYKQLQTLLRGNS
FVEFMAEEQLEQVTAIAAERLQRLTRHRYSLELDSQGGFLIRDDANGGVRRPVATLSGGE
TFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLDMVISALEKLHTQQLAVGV
ISHVQEIRTRLPRRLIVEPAEPSGRGTRVRLETM
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgatttcactgacgattgccgggcttcatagtttccgcgaaaaacagacgatc
gatttcactgtgctgtgcgatggtggcgtgtttggtattttcggtccgaccggaagcggc
aaatcaacgattttagacgccattacgctagcgctgttcggcagtgttgagcgggccgct
aaccgcactcaagcgatcatcaatcatgctgaacaagaattgttcgtctcatttacgttt
gagctcgaaaatgcggcgggagccaaacggtatacagtggagcgcagcttgaaaaaggtg
gacgagtggcggacgcgaagcgccgtctgccggttgatcgaacatcaaccggagccggtc
gtgctcgctgacaaactgtccgatgtggacaaagcgattggacaattgcttggtctgacg
atggaagatttcacccgggcggtcgtcttgccacaaggcaaatttgccgaatttttatcg
cttaaaggggcagagcggcggcaaatgctgcagcgcctgttccatcttgaacggtatggg
gaccaactaaacaaaaagctgaaagatcggcttatcgccgctgaacaagaagaggaaaaa
atcgaagcggagaaggccgggcttggtgacgcgtcgaaagcagcactcgagcaagcggag
acagaggagcgggagctggcagcgctgctggcgaagcgaaaaaaagagcttgaggaagtc
gaagcaaatgttgaacggacgaaacagctttgggtgtggcagcaagaaaaagaaacgatc
gaaagagagctggctgagctgcgtcggcatgagccggatatccgtgcgctcgaagtaaaa
aaagagcgcgctgagcaggctgagcgcatttggccatactgggaacagtacgaacaggcg
cgacgttcacaaatagcggccctcaaacggtacgaagagctggcgcgaaagctggagacg
gccaaggctagccacgaggaagcagtacgccgctatgagcaggcacggctggaaaaagcg
aggcgagaaccagagctgctggcgcaaacagagcggctgcgccaggcggaacaactcgag
cggcaaatggagacaatcaagcgcgagcttgctgctctcgatgaggagcacaaccgtttg
gcggttcgggagaaagcggcgcaacgtcagttcgaagaggcgtctgcttggtatgaacgc
ggcatgaagcggcagcaggagctaaaagaagagctgcaacgatatacggaggcactagct
agaaaagacgaagtagagcgggcgcatggggagaagcggcagatcgagcaagcggcatca
gccgtcgcccgtgttgatgcacagcttcggcaaaaggaagaggtttggcgccaagcggaa
gaggaacggatcaagagggaacgtcaggcggccgttgccggcgctcggcttcatcagctg
tttcgacttgtggagaaaacgtatcattccgtctgtgagcggcagcaagacatcgaaaaa
cggctgtatgcgttgcagcaggacatcgaggcggagcgggagcggattgaggaagcgcga
acggcagaactggcggctgtactggcagaacgactccgccccggggagccgtgcccggtg
tgcgggtcgcgcgaacacccacatccgtccaccaagccgtattccaccggccaggggcga
ctgcctgatcttgagcaggagcggcgacaatgcgagcaagatttacaaactttgttttca
ttaaaggcgcagctcgaacagcttgcggggcttgctgctggtcatggggtacctcctgtc
tttactgagggccgcccgacagaagaagtgagcgatgtcttcgttgaagtacgagcgctt
cagcaggatatcattgagcaaaaagaatccgtttatcgggcgcttgcacaatggaacgaa
gcggaagcagcaaggcgtgaagcggaaaacgcatgccgatgggcagcagctgatatggaa
gcgttgcaagctgagaggcggcgtctagaagaagaacggcagcggcttgaacagcactgg
cggcagacctacccttctttttcgctcgagacgatcgacatcgtatacgagcagcttcgt
gaacaagagaaaaagtggcgcgatgtgcaaaaacggcttgaggatagtgtgccgttttta
gaagaaaaacagcgggcaaaagagaaagcggctgaagaacaacgtcggatcgagacggag
cgggttcgccttgactcactcattagcaccaaacagcagctatgggaagagtatgaacga
cagcgacgcgagaaagctggtcctaacccggcggctcagcaacttcgggaagcggaatcg
gaatggcgccggctgcaaaacgatgagcagcaggcgtatgatgaatggcaacgtgtccaa
aaagtgtatcaaacgctagaaagcgagacaaaagtggccaagcaggcggtcgaagaaggc
gcacgtcgtgaagaagaagcgctcgcccgttggcgcctcgtccttgccgatactacgttt
gccgatgctgaagaagctgaacgggcgaaagcgacgaaggagcaatgcagcgagtgggat
gaagccatccgccgctattggcgccaagttgaacaggcggagcaccgtcgggctcaactt
tcggcggcccttggcgaggaggcagtgagcgctgaacaatgggagatgttgcagcgtgta
tacgccgagctaaaagcggaaatggaaacgatgacgcaacaacttggggcggttcaagga
aaagtggcggagctgagaaaaaaacatgctcgttttgttgaactcgaggcaaagcaaacg
cagctcagccggcaaatcgagcggtacaagcaactgcagacattgcttcgtggcaatagt
tttgtcgagtttatggcggaagagcaactcgaacaagtgacggccatagcggctgagcgg
ttgcaacggttgacaaggcaccgttactcgcttgaacttgattcacaaggcggatttctc
attcgcgatgacgccaacggcggcgtcagaaggccagtggccacgctctccggtggggaa
acgtttttgacctcattgtcactggcgctggcgttgtcggcgcaaattcagctgcgcggc
gaatatccgctccggtttttctttttggacgagggctttggtacgcttgacgccgagctg
ctcgatatggtgatttccgctttggagaagttgcatacacagcagttggcggtcggcgtt
attagccatgtccaagaaattcgcacgcgtctgccgcggaggctcatcgttgagccagcg
gagccatcgggccgcggcacgcgcgtccggctggaaacgatgtag
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