Geobacillus thermodenitrificans: GTNG_1064
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Entry
GTNG_1064 CDS
T00496
Name
(GenBank) DNA Topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtn03032
]
GTNG_1064
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_1064
Enzymes [BR:
gtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GTNG_1064
DNA replication proteins [BR:
gtn03032
]
Prokaryotic type
DNA Topoisomerases
GTNG_1064
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GTNG_1064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Auto_anti-p27
ATG19
Toprim_2
Lar_restr_allev
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ABO66440
UniProt:
A4IM86
LinkDB
All DBs
Position
1130665..1132740
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPTKAKTIERYLGKKYTVKASMGHVRDLPKSQMGVDINDGYTPKYITIRGK
GQVIKELKTAAKKAKKVFLAADPDREGEAIAWHLANMLDLDIHSDCRVVFHEITKDAIKQ
SFQQPRSINMNLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLIIDREK
EIRQFQPEEYWTIQAKFQKGKEAFAASFYGVDGEKLELKTEADVKEVLARLNGRAFTVKT
VTKRERRRSPVPPFTTSSLQQEAARKLNFRTKKTMMVAQQLYEGIDLGGEGTVGLITYMR
TDSTRIAETAQQEAAAYIEATFGAQYVHQEKRKEKKSTNAQDAHEAIRPTSAFRDPDKVK
PYLTRDQFRLYKLIWERFIASQMAAAVLDTMSVELENNGVLFRASGSKVKFPGFMKVYIE
GTDDQTEEQDRLLPDLEEGEAVESEMIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRNYVVLENKRFVPTELGEIVVELILEFFPEIIDVEFTAKMEKELDEIEEGK
VEWIKVVDEFYREFEKRLKVAEKEMREVEIKDEPAGIDCDVCGSPMVYKMGRFGKFIACS
NFPECRHTKPIVKEIGVKCPKCHEGNIVERNSKRKRVFYGCDRFPECDFVSWDKPLARPC
PKCGGLLVEKKLKKGVQVQCTACDYEEQPEA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactacttggttatcgtcgaatcgccaacgaaagcgaagacgatcgaacgatac
ttagggaaaaaatatacggtcaaagcttcgatgggccacgttcgcgatttgccaaaaagc
caaatgggcgttgacataaatgacggctatacgccgaaatatattacgatccgcggcaaa
ggccaagtgattaaagagttgaaaacggcagccaaaaaggcgaaaaaagtgtttctcgct
gccgacccggaccgtgaaggggaagcaatcgcctggcatttggccaacatgctcgatctc
gatattcactctgattgccgcgtcgtctttcatgagattacaaaagacgccattaaacaa
tcattccagcaaccgcgctcaatcaatatgaatctcgtcgatgcccagcaagcgcggcgc
gtgcttgaccgtctcgtcggctataacatcagccccctcttgtggaaaaaagtgaaaaaa
gggctgagtgccggccgcgtccaatcagtcgcgctgcgtctcattatcgatcgggaaaaa
gaaatccgccaatttcaaccggaagaatattggacgattcaagcgaaatttcaaaaaggg
aaagaggcgtttgccgcctcgttttacggcgttgacggggaaaagctggaattaaaaacg
gaagcggacgtaaaagaagtgctcgcccgtttaaacgggcgagcgtttacggtgaaaacg
gtgacaaagcgcgagcgccggcgcagcccggtgccaccgtttacaacgtcatcgcttcag
caggaagcagcgcgcaagttgaatttccgcacaaaaaagacgatgatggtcgcccagcag
ctgtacgaagggattgatctcggcggagaagggacagtcgggttgataacgtatatgcgt
accgactcgacgcgcattgccgaaacagcgcaacaggaagcagcggcgtatatcgaagcg
acgttcggcgcccagtacgtccatcaagaaaagcggaaggaaaagaaaagcacgaacgcc
caagatgctcacgaagccattcgcccgacctcggcatttcgcgatccggataaagtgaag
ccatatttgacgcgcgaccagttccggttgtataaactcatttgggaacggtttatcgcc
agccaaatggcggcggctgtactggacacgatgagtgttgaacttgaaaataatggggtg
ctgttccgcgccagcggttcgaaggtaaagttcccagggtttatgaaagtatacatcgag
gggacggacgaccaaacggaagaacaagatcgtctgcttcctgatcttgaggaaggagag
gcggtcgaaagtgaaatgatcgagccgaagcagcatttcacccagccgccgccgcgctat
acagaagcgcgccttgttaaaacgttagaagagctcggcatcggccgtccgtccacctac
gcgccgacgcttgatacgattcagaaacgcaactacgttgttcttgaaaacaagcggttc
gtcccgacagagcttggtgaaatcgtcgtcgagcttattttagaattttttccagaaatt
attgatgtcgagtttacggctaaaatggaaaaagagcttgatgaaatagaagaaggaaaa
gtagagtggatcaaggttgtggatgaattttaccgcgagtttgagaagcggctaaaagtg
gccgaaaaagaaatgcgcgaagtggaaattaaagatgagccagccggcattgactgcgac
gtgtgcggcagtccgatggtgtacaaaatgggtcgctttggtaaatttatcgcttgctcg
aactttccggaatgccgccatacgaaaccgattgtgaaagaaatcggcgtcaaatgcccg
aaatgccatgaagggaatattgtcgagcgcaacagcaagcgaaaacgggtgttttacggc
tgcgatcgcttcccggaatgcgactttgtttcgtgggataaaccgcttgcgcgcccgtgt
ccaaagtgcggagggctgcttgtcgagaaaaagctgaaaaagggtgtgcaagtccaatgc
acggcgtgcgactatgaggaacaaccagaagcttga
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