Geobacillus thermodenitrificans: GTNG_1120
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Entry
GTNG_1120 CDS
T00496
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gtn03016
]
GTNG_1120
Enzymes [BR:
gtn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GTNG_1120
Transfer RNA biogenesis [BR:
gtn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GTNG_1120
Prokaryotic type
GTNG_1120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABO66494
UniProt:
A4IME0
LinkDB
All DBs
Position
1182538..1183446
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AA seq
302 aa
AA seq
DB search
MDGVLLLNKPKGMTSHDCVAKVRRLLGIKKVGHTGTLDPNVSGVLPICLGKATRIAEFLT
GATKTYEGEVTLGAATSTEDADGDIIAVQTVDRTIARAEIEAVFRSLTGDIEQTPPMYSA
VKVNGKKLYEYARAGIEVERPTRRVTIYELELLDEREQFVGETVSFRFRVMCSKGTYVRT
LAVTIGERLGYPAHMSDLIRTASGPFQLADCVTLEEVERRAADGTVDALLIPIEQALFHL
PKYEISDKVAEKVKNGALLRLPAFLQELDGPVLLVTPEREAMALYVKHPARPGVMKPLKV
FR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctactcaataaaccgaaagggatgacgtcgcacgattgtgtggcg
aaagtacgacgcctgctgggcataaaaaaagtcggtcataccggcacgctcgacccaaac
gtgtctggtgtgctgccgatttgcctcggcaaggcgacgcgcatcgccgaatttttaacc
ggagcgacaaaaacatatgaaggggaagtgacacttggcgcagcgacgtcgaccgaagac
gccgatggtgacatcatcgccgtccagacggttgaccggacgattgcgcgtgcggagatc
gaagcggtattccgcagcctcactggggatatcgaacaaacgccaccgatgtattcggcg
gtgaaagtaaacggcaaaaaactgtatgaatatgcgcgtgctggcatcgaagtcgaacgc
ccaacgcggcgtgtgaccatttacgagcttgagctgcttgatgaacgcgagcaattcgtc
ggggaaacagtgtcgtttcgcttccgtgtcatgtgcagcaaaggcacgtacgtccgcacg
ctcgctgtcaccattggcgagcggctcggctatccggctcatatgtctgatctcatccgc
acagcgtctgggccgtttcagctggctgattgtgtgacgcttgaagaggtcgagcgccgg
gcggctgacgggacggtcgatgccttgctaattccaatcgagcaagcgctttttcatttg
ccgaaatacgaaatcagtgataaagtagcagagaaagtgaaaaacggggcgctgcttcgt
ctccccgcctttttgcaggagcttgacgggccggttctgctcgtgacgcccgagcgggag
gcgatggccctgtacgtgaagcatccggcccgccccggtgtgatgaagccgttgaaagtg
tttcgttaa
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