KEGG   Geobacillus thermodenitrificans: GTNG_1151
Entry
GTNG_1151         CDS       T00496                                 
Name
(GenBank) HDIG/HD/KH domain protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
gtn  Geobacillus thermodenitrificans
Pathway
gtn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gtn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GTNG_1151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtn03019]
    GTNG_1151
Messenger RNA biogenesis [BR:gtn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GTNG_1151
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B EAD2 DUF3450 KH_2
Other DBs
NCBI-ProteinID: ABO66525
UniProt: A4IMH1
LinkDB
Position
1215436..1216992
AA seq 518 aa
MGSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKRAADALKKEALLEA
KDEIHKLRTEAEHDIRDRRSELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNER
QQHIEQMESKVETLIKQQQTELERISGLTRDDARHLILERVEKELSHEIAMMVKEAETRA
KEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVGKARREVDEHIREV
GEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLAR
RAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVIAVLVAA
ADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL
EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgggttcgatcatcatctccgctttgcttgccttagtcattggtgccgttgttggcttt
tttgttcgcaaatcgattgccgaagcaaaaatcggtggggcgaaagcagctgccgagcag
ctgattgaagaggcgaaacgcgcggcggacgccttgaaaaaagaggcgcttctcgaagcg
aaagacgagattcataaattgcgtacggaagcggaacacgatatccgcgaccggagaagc
gaactccaaaaacaagaaaaccgcttgatgcaaaaggaggaaaacctcgaccgcaaagat
gaggcgctcaataaacgcgaggcgctgctcgaagcgaaagaagaagcgttaaatgaaaga
caacagcatattgaacaaatggaaagcaaagtggaaacgctcatcaaacagcaacaaacc
gaactcgaacgcatttccggattaacgcgcgacgatgcgcgccacctcattttagagcgc
gtcgaaaaggaactgtcgcatgagattgcgatgatggtcaaagaagcggaaacgcgggcg
aaagaggaggcagacaagcgagcaaaggcgattttgtcactcgccatccagcgctgcgcc
gccgatcatgtcgccgaaacgactgtctctgtcgtgaacttgccaaacgatgaaatgaaa
gggcggatcatcggacgcgaagggcggaacatccgtacgctcgagacgctcaccggcatt
gatttaattattgacgatacaccggaggcggtcattttgtccggatttgacccgattcgt
cgcgaaacagcgcgcattgcgctagataagctcgtgcaggacggccgaatccatccagcg
cgcattgaagaaatggtcggaaaggcgcgccgcgaagtggatgaacacatccgcgaagtc
ggtgaacagacgacgtttgaagtcggcgtccacggcttgcatccggatttgattaaaatt
ttagggcggcttaagttccggacgagctacgggcaaaacgtcctaaaacattcggtggaa
gtggcgtttttagccgggctgatggcggccgagctcggggaagacgaaatgttggcgcgt
cgggccggcttgcttcatgacatcggcaaggcgatcgaccatgaagtggaaggaagccat
gtggaaatcggcgttgagttggcgacgaagtataaagaacatcccgttgtcatcaacagc
atcgcctcccaccatggcgataccgagccgacatcagtcatcgccgtgctcgttgcggca
gcggacgccctgtcggcggcacggccgggggcgcgcagcgaaacgctggaaaactatatc
cgccgcttagagaagctcgaagaaattgcggaatcgtacgaaggggtggaaaaatcgtac
gccatccaagctggccgcgaagtgcgcatcatggtcaaaccagatatgatcgacgatttg
gaagcgcatcggttggcgcgcgatatccgcaagcgaatcgaagaagagctcgattatccg
ggtcatattaaagtgacagtcatccgcgaaacgcgggcggtcgaatatgcgaaataa

DBGET integrated database retrieval system