Geobacillus thermodenitrificans: GTNG_1276
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Entry
GTNG_1276 CDS
T00496
Name
(GenBank) DNA replication helicase, Dna2-like protein
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
gtn
Geobacillus thermodenitrificans
Pathway
gtn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTNG_1276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtn03032
]
GTNG_1276
Enzymes [BR:
gtn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GTNG_1276
DNA replication proteins [BR:
gtn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
GTNG_1276
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
GTNG_1276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
PhoH
UvrD-helicase
UvrD_C_2
AAA_22
DEAD
ResIII
AAA
AAA_24
AAA_16
Cas_Cas4
cobW
Motif
Other DBs
NCBI-ProteinID:
ABO66646
UniProt:
A4IMU2
LinkDB
All DBs
Position
1348463..1352233
Genome browser
AA seq
1256 aa
AA seq
DB search
MFYVSPAKIASYFYHECERNLYFRSLAKERRGELDVPEELFRRPASHENVLRRGVEWEKT
VISTYLADEVKMGKQVSDLPLSHCYLDSEETIRELKEPSKRYLYQPTLIVPPRFYERYGL
NPGTVRFAACRPDVIECVRGQDGWTFRIIDIKSSDALQFSHRVQTALYALILSFVLEEHG
IKGKVDLDETRIWTYGAEQPQTTNIRQLIPYIEHFLSSELTILTEKQADDLFWHLDYRCE
WCPFYSYCLDKARQQAHISLVPYLSSYTSRFVREQQLPETIRAFHQFLQREENGSVLKQN
ATLARQRRRLETQLMAIAKEKVIPHDRVVADMPKWEDIRLIFTAQRDQATGKIAAASLYR
VGGIDVFGTGSEMHHFVARCLEECDAVIRKFVDALDRLLQTVHDYNKTREWQAQKSVQAY
VVDNYEWDNLQHMLSELLLDREYQEKAVRLLFYFHSGVLSSAHQHPKEMVPLPVVVLTTV
ASQLFALPVHVAYRLEDLSAYIAAYSDRPFTYRANERFSFRLTNAMKMDVLHDAWQTGDE
EKRKEVEGELRRRLWAAHSIIRGIRAWAARIQPSPLAVWPEKFRFPDSAHYRDPLISKLA
FMARYEALLNYLDVRQRRSLPLADRLETGVTLHITYLGAKRFRLNNRHALEAIDQKANWL
LTECDEEGEKAQQTFPDMKYAGDRSAPRWANLYFARIRTIDDDGKTAELELELPRLLDRF
PLVKGENYLLSLRYADLTTVRVLRALQALDQENHRILDLIRDPIRYRKTFRPKWEADEVK
ALLRESRLTKSQRQAFLHLLRYTLTLVWGPPGTGKTHFIAAALRLLMAIYEKRGRRLAIL
ISGFTHAAIENCLNKIKELAPQGKVSIAKLGAVQTENAKGIIELADGEVWEWLDSGRHCV
LGATLYGIQRAHEKGLLAGGFDVVVLDEASQIRVADSLLALRHVKKAGRLLIVGDHFQLP
PIIQGAYKTVEGEPPLFESIFRLLFDADVEKRLTCQLTDNFRMNETLCRYPAEQIYGRDY
TAFNRRIAEQTLTLAAAPTADEWVEAAIDPDYPLVVCTYDGVYGAQENEAEARWVASVTK
TLRERLLDGDGKRYHDTPDGDKAFWRNGLFIISPHRAQIRAIRRALEREGLRPPFFVDTV
DKMQGQEAEAAIISYGVADPELAAMEGEFIYSLNRLNVSLTRARKKTILFLSRHLLSPSL
HVLGNDDYREGVNFMIGLEHYASRHGEAQTFVVDGAVLHMYRVGCRVFDQVASRHH
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgtttctccggcgaaaattgccagctatttttaccatgagtgtgagcgaaac
ttgtattttcgatcattggcgaaagagcggcgcggcgagctcgatgtgcctgaagaactg
tttagacggccggcgagccatgaaaacgtgttgcgccgtggggtggagtgggagaagacg
gtaatttccacctatttggccgatgaagtgaagatgggcaagcaggtgtctgacttgcca
ctttcacattgttatttggatagcgaagagacgatccgggagctgaaggagccgagcaag
cgatatttgtatcagcccaccttgattgtgccgccccgtttttacgaacggtacggattg
aatccgggaaccgtccgttttgcggcgtgccgtccggatgttattgaatgtgtgcggggg
caagacggttggacgtttcgcatcattgatataaaatcgtccgacgcattgcaattttct
caccgtgtgcaaacagcgctgtacgcactgattttatctttcgttttagaagagcatgga
atcaaagggaaggttgatttggacgaaacgaggatatggacgtacggggctgagcagccg
caaacgaccaacattcgccagctgattccatatattgaacattttttatccagtgagctg
acgatactgacggaaaaacaggcggatgacttgttttggcatttggattaccgttgcgaa
tggtgtccattttatagctactgtttggacaaggcgcggcaacaggcgcacatttccctt
gtcccgtacttatccagctacacctcccgcttcgtccgcgaacagcaattgcctgaaact
attcgagcgtttcaccaatttcttcagcgtgaagaaaacggatccgtgctgaaacaaaac
gccacattggcccgccagcgccggcggcttgaaacccagcttatggccatcgctaaagaa
aaagtcattccgcacgatcgcgttgtagcggatatgcccaagtgggaggatatccgtttg
attttcaccgcccagcgcgatcaggcgacggggaaaatcgcggccgcatcgttgtaccgc
gttggcggaatagacgtgtttggaacgggatcggaaatgcatcattttgtcgcccgctgt
ttggaagaatgcgatgcggtcattcggaagtttgtcgacgcgctcgatcgcttgcttcag
acggtgcatgattacaacaaaacgcgcgaatggcaggcgcaaaaatccgtgcaggcgtat
gtcgttgacaactatgaatgggacaacttgcaacatatgctttctgagcttctgcttgat
cgcgaataccaagaaaaagcggttcgtctattattttattttcatagtggtgtgctatcg
agcgcccatcagcacccgaaggagatggttccgcttccagttgtcgttttgacgaccgta
gcgagccaactgtttgctttgccggtgcatgttgcttaccgtcttgaggacttgtcggcg
tatatcgccgcttacagcgatcgtccgtttacgtatcgagcgaacgagcgcttttcgttt
cgcttgacaaacgccatgaaaatggatgtattgcatgacgcgtggcaaaccggggacgaa
gaaaaaaggaaagaggttgagggggaactgagacgccgcctttgggctgctcacagtatc
atccgaggtatccgtgcttgggctgctcgtatccagccttctccgctcgccgtttggccg
gaaaaattccgttttcccgattcggctcattaccgtgatccgctcatttcgaagttggcg
tttatggcgcgctacgaggcgctattaaactacttggatgttcgtcagcgccgctcgctt
ccgcttgccgatcggcttgaaacgggagttacgcttcatataacgtaccttggcgccaag
cggtttcgattgaacaatcgacatgcacttgaagcaatcgaccaaaaagccaactggctg
ttgacggaatgtgatgaggaaggggagaaagcgcaacagacgtttcccgatatgaaatac
gcaggcgaccggtcggcgccgagatgggccaacttgtactttgcccgtattcgcacgatc
gatgatgatggcaagacggctgaacttgaactcgagctgcctcgattgcttgaccgtttc
ccgcttgtcaaaggcgagaattatttgctgtcgctgcgctatgccgatttgaccacagtg
cgcgtcttgcgggcgctgcaagcgttggatcaggaaaatcatcgcattctggatttgatc
cgcgacccgatccgctatcgaaaaacgttccggccgaagtgggaagcggacgaagtcaag
gcgcttctccgtgaaagcaggctgacgaaaagccagcgtcaagcgtttctccatcttctt
cgttatacattgacgctcgtttgggggccgccgggcacggggaaaacgcactttattgcc
gcggcgcttcgtttgctgatggcgatttatgagaagcgagggcggaggctcgccattctt
atttctggcttcacccacgcggcgatcgaaaactgcctgaacaaaatcaaggaacttgcg
ccgcaagggaaggtaagcattgcgaagctcggcgcggttcagacggaaaacgccaaaggg
atcatcgaactggcggacggcgaagtttgggaatggcttgacagcggccgtcattgcgtg
cttggcgccacgctgtacggcatccaacgagcgcatgaaaaaggattgctagctggcgga
tttgacgtcgtcgtgctcgatgaagcgtcgcaaattcgggtggctgattcgttgctcgcg
ctccgtcatgtgaaaaaggcaggaaggctgctcattgttggcgaccattttcagctgccg
ccgattattcaaggagcgtacaagaccgtcgaaggggagccgcctttgttcgaatcgatt
ttccgcctgctgtttgacgcagacgtggagaagcggctcacttgccagttgacggataat
ttccgcatgaatgagacgctctgccgctatccggctgagcagatttacggacgggattat
acggcgttcaaccgtcgaattgccgagcaaacgctgacgctcgccgccgctccaactgcc
gatgaatgggtggaagcggcgatcgatcccgactatccgcttgtcgtctgcacgtatgat
ggcgtgtacggcgcacaagaaaacgaagcggaagcgcgttgggtggcgagcgtaacgaaa
acgcttcgggagcggctgcttgatggcgatggaaaacgatatcatgatacgccagacggc
gacaaggcgttttggcgcaacggactgtttatcatctcgccgcatcgcgcgcaaatccgc
gccattcgccgcgcgcttgaacgcgaggggctgcgtccgccgtttttcgtcgatacggtc
gacaaaatgcaaggtcaggaggcggaagcggccatcatcagctacggcgtcgccgacccg
gaactggccgcgatggaaggggagttcatctacagcctcaaccgattgaacgtctcgctc
acacgcgcgcggaaaaagacgattcttttcctttcccgccatcttctatccccatcgctg
cacgtcttaggaaacgacgactatcgcgaaggggtgaactttatgatcggtctcgagcac
tatgcgtcgaggcacggagaagcccaaacgttcgttgtcgacggtgccgtcctgcacatg
tatcgagtcgggtgccgcgtgttcgatcaggtggcttcccgccaccattaa
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