Geobacillus thermodenitrificans: GTNG_2654
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Entry
GTNG_2654 CDS
T00496
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gtn
Geobacillus thermodenitrificans
Pathway
gtn03030
DNA replication
gtn03410
Base excision repair
gtn03420
Nucleotide excision repair
gtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GTNG_2654
03410 Base excision repair
GTNG_2654
03420 Nucleotide excision repair
GTNG_2654
03440 Homologous recombination
GTNG_2654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtn03032
]
GTNG_2654
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_2654
Enzymes [BR:
gtn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GTNG_2654
DNA replication proteins [BR:
gtn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GTNG_2654
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GTNG_2654
NER (nucleotide excision repair)
GGR (global genome repair) factors
GTNG_2654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Enkurin
HHH_2
DUF3913
Imm64
Motif
Other DBs
NCBI-ProteinID:
ABO67999
UniProt:
A4IRP5
LinkDB
All DBs
Position
complement(2760482..2763118)
Genome browser
AA seq
878 aa
AA seq
DB search
MRLKKKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEQPTHLLVAF
DAGKTTFRHETFQEYKGGRQQTPPELSEQFPLLRELLKAYRIPAYELDHYEADDIIGTLA
ARAEQEGFEVKIISGDRDLTQLASRHVTVDITKKGITDIEPYTPETVREKYGLTPEQIVD
LKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEVKGEKLKENLRQHRDLAL
LSKQLASICRDAPVELSLDDIVYEGQDREKVIALFKELGFQSFLEKMAAPAAEGEKPLEE
MEFAIVDVITEEMLADKAALVVEVMEENYHDAPIVGIALVNEHGRFFMRPETALADSQFL
AWLADETKKKSMFDAKRAVVALKWKGIELRGVAFDLLLAAYLLNPAQDAGDIAAVAKMKQ
YEAVRSDEAVYGKGVKRSLPDEQTLAEHLVRKAAAIWALEQPFMDDLRNNEQDQLLTKLE
QPLAAILAEMEFTGVNVDTKRLEQMGSELAEQLRAIEQRIYELAGQEFNINSPKQLGVIL
FEKLQLPVLKKTKTGYSTSADVLEKLAPHHEIVENILHYRQLGKLQSTYIEGLLKVVRPD
TGKVHTMFNQALTQTGRLSSAEPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQIE
LRVLAHIADDDNLIEAFQRDLDIHTKTAMDIFHVSEEEVTANMRRQAKAVNFGIVYGISD
YGLAQNLNITRKEAAEFIERYFASFPGVKQYMENIVQEAKQKGYVTTLLHRRRYLPDITS
RNFNVRSFAERTAMNTPIQGSAADIIKKAMIDLAARLKEEQLQARLLLQVHDELILEAPK
EEIERLCELVPEVMEQAVTLRVPLKVDYHYGPTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaagaaaaaactcgtcttaattgatggcaacagtgtggcataccgcgccttt
tttgccttgccacttttgcataacgacaaaggcattcatacgaatgcggtttacgggttt
acgatgatgttgaacaaaattttggcggaagaacaaccgacccatttacttgtagcgttt
gacgccggaaaaacgacgttccggcatgaaacgtttcaagagtataaaggcggacggcaa
caaactcccccggaactgtccgagcagtttccgctgttgcgcgagctattaaaagcgtac
cgcattcccgcttatgaacttgatcattacgaagcggacgatattatcgggacgctcgct
gcccgcgctgagcaagaagggtttgaagtgaaaatcatttccggcgaccgcgatttaacc
cagctcgcctcccgtcatgtgacggtcgatattacgaaaaaagggattaccgacattgag
ccgtatacgccagagaccgttcgcgaaaaatacggcctgactccggagcaaatagtggat
ttaaaaggattgatgggcgataaatccgacaacatcccgggcgtgcccggcatcggggaa
aaaacggcggtcaagctgctgaagcaatttggtacggtggaaaatgtgctcgcatcgatt
gatgaggtgaaaggggaaaaactgaaagaaaacttgcgccaacaccgggatttagctctc
ttgagcaaacagctggcgtccatttgccgcgacgccccggttgagctgtcgttagatgac
attgtctacgaaggacaagaccgcgaaaaagtcatcgcgttatttaaagaactcgggttt
cagtcgttcttggaaaaaatggccgcgccggcagccgaaggggagaaaccgcttgaggag
atggagtttgccatcgttgacgtcattaccgaagagatgcttgccgacaaggcagcgctt
gtcgttgaggtgatggaagaaaactaccacgatgccccgattgtcggaatcgcactagtg
aacgagcatgggcgattttttatgcgcccggagaccgcgctggctgattcgcaattttta
gcatggcttgccgatgaaacgaagaaaaaaagcatgtttgacgccaagcgggcagtcgtt
gccttaaagtggaaaggaattgagcttcgcggcgtcgcctttgatttattgctcgctgcc
tatttgctcaatccggctcaagatgccggcgatatcgctgcggtggcgaaaatgaaacaa
tatgaagcggtgcggtcggatgaagcggtctatggcaaaggcgtcaagcggtcgctgccg
gacgaacagacgcttgctgagcatctcgttcgcaaagcggcagccatttgggcgcttgag
cagccgtttatggacgatttgcggaacaacgaacaagatcaattattaacgaagcttgag
cagccgctggcggcgattttggctgaaatggaattcactggggtgaacgtggatacaaag
cggcttgaacagatgggttcggagctcgccgaacaactgcgtgccatcgagcagcgcatt
tacgagctagccggccaagagttcaacattaactcaccaaaacagctcggagtcatttta
tttgaaaagctgcagctaccggtgctgaagaagacgaaaacaggctattcgacttcggct
gatgtgcttgagaagcttgcgccgcatcatgaaatcgtcgaaaacattttgcattaccgc
cagcttggcaaactgcaatcaacgtatattgaaggattgttgaaagttgtgcgccctgat
accggcaaagtgcatacgatgttcaaccaagcgctgacgcaaactgggcggctcagctcg
gccgagccgaacttgcaaaacattccgattcggctcgaagaggggcggaaaatccgccaa
gcgttcgtcccgtcagagccggactggctcattttcgccgccgattactcacaaattgaa
ttgcgcgtcctcgcccatatcgccgatgacgacaatctaattgaagcgttccaacgcgat
ttggatattcacacaaaaacggcgatggacattttccatgtgagcgaagaggaagtcacg
gccaacatgcgccgccaggcaaaggccgttaacttcggtatcgtttacggaattagcgat
tacggattggcgcaaaacttgaacattacgcgcaaagaagctgccgaatttatcgaacgt
tacttcgccagctttccgggcgtaaagcagtatatggaaaacattgtgcaagaagcgaaa
cagaaaggatatgtgacaacgctgttgcatcggcgccgctatttgcctgatattacaagc
cgcaatttcaacgtccgcagttttgcagagcggacggccatgaacacgccaattcaagga
agcgccgctgacattattaaaaaagcgatgattgatttagcggcacggctgaaagaagag
cagcttcaggctcgtcttttgctgcaagtgcatgacgagctcattttggaagcgccaaaa
gaggaaattgagcgattatgtgagcttgttccggaagtgatggagcaggccgttacgctc
cgcgtgccgctgaaagtcgactaccattacggcccaacatggtatgatgccaaataa
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