Geobacillus thermodenitrificans: GTNG_3372
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Entry
GTNG_3372 CDS
T00496
Name
(GenBank) Sigma-B general stress transcription factor
KO
K03090
RNA polymerase sigma-B factor
Organism
gtn
Geobacillus thermodenitrificans
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtn03021
]
GTNG_3372
Transcription machinery [BR:
gtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GTNG_3372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_38
Sigma70_r4_2
HTH_50
KORA
HTH_23
HTH_10
HTH_Tnp_ISL3
HTH_28
HTH_36
HTH_3
HTH_24
HTH_Crp_2
HVO_A0261_N
Sigma70_ECF
HTH_Tnp_4
HTH_31
Trp_repressor
GerE
CT_C_D
HTH_29
CENP-B_N
MarR
HTH_11
DUF1492
DUF4423
ARTD15_N
DUF8073_C
Motif
Other DBs
NCBI-ProteinID:
ABO68709
UniProt:
A4ITQ5
LinkDB
All DBs
Position
3476792..3477568
Genome browser
AA seq
258 aa
AA seq
DB search
MPMNVYPPPLSKSKLDALISAYQQTKTEEAATALLVRFEPLIAAAAKKMARSRPDFYEDL
FQVGRLSFLRLLEHYDPNQGTSFESYAMKSLIGYMKNYLRDKAWYIQVPRRVKENGSKVQ
KAIDELTVTLERSPNIEEIANHLGLSVEETIEILAGRDHYQAISIDAPVQDGEKDATTIG
EFLADDTNEVEALIERLDLQEAIGKLSEQERIVIEAVFRRGETQRSLAKRLGVSQMTISR
IQKRAIEKLKRQLAAYSS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaatgtatatccccctcctctgtccaagagcaagcttgacgccctcatttcc
gcctatcaacaaacaaagacggaagaagcggcgacagcactgctcgttcgcttcgagccg
ctcattgcggccgcagcaaaaaaaatggcgcgcagccgtcctgatttttatgaggactta
tttcaagtcggacggttatcgtttttgcgcctccttgagcattacgacccgaaccaagga
acaagctttgaatcgtatgcaatgaaaagcttgatcggctatatgaaaaactatttgcgc
gacaaagcgtggtatattcaagtaccgcgcagagtgaaagaaaacggaagcaaagtgcag
aaggcgatcgatgagctgactgtcacacttgagcgatcaccgaacatcgaggaaatagcc
aaccatttaggtttatcggtcgaagaaacgattgaaattttggctggccgcgaccattat
caggcgatttccatcgatgcccccgtgcaagacggggaaaaggacgcgacgaccatcggc
gaatttcttgccgatgacacgaatgaggtcgaggcgctgatcgagcggcttgacttgcaa
gaagccatcggcaagctgagcgagcaggagcggatcgtcatcgaggcggtgtttcgccgc
ggagaaacacagcgctcgctcgctaaacggctcggcgtctcccaaatgacgatcagccgc
atccaaaagcgggcgattgaaaaactgaagcggcagcttgccgcctattcgtcataa
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