Gloeophyllum trabeum: GLOTRDRAFT_102290
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Entry
GLOTRDRAFT_102290 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04138
Autophagy - yeast
gtr04142
Lysosome biogenesis
gtr04145
Phagocytosis
gtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
GLOTRDRAFT_102290
04142 Lysosome biogenesis
GLOTRDRAFT_102290
04138 Autophagy - yeast
GLOTRDRAFT_102290
04148 Efferocytosis
GLOTRDRAFT_102290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_102290
Membrane trafficking [BR:
gtr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
GLOTRDRAFT_102290
Hops complex
GLOTRDRAFT_102290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
zf-RING_5
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-RING_11
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
19298491
NCBI-ProteinID:
XP_007860930
JGI:
Glotr1_1_102290
UniProt:
S7QM57
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MFDEFVEHAAAPNGGLGHGASALPQVQYEGFEPSPYERDDFREEFEEAALGEETDPAAAA
GPVFELGRVQYTLPAPLVSMAVSSDVLAMALASNTIVLIALAHADQVMKIQIPRKTNEMS
VSKIFMDPSGRHIIVTSPQGENWYLYRTWKKPRQLKGFKMVIESIAWNKAALLSSHSTST
REMLIGARNGTIYEAVLDAEEDFFKSQERYLQSLFSLPERHPVTGIKFDLFPASDPRRAL
VIVTTPSRIYQFVGVPDRRTEEGGRIFSNLFASYRDVAPTIFEIPGGLDHSELHVYTPDA
EQVLSLPKTMAWMASLGIYHGTLNFESTSDNLIDNAQMLPYPSLSGLSPQEWPKSIALTE
FHFLLLYKDRVAAICNLDEKLSYEEMLPLKPNEEVKGLAADPVRKTYWVYTDQSLFELVV
GNEDRDVWKVYLERGQYDLSLRYAKTARQRDRVLSAHANALFNEGRYFQAAQAYSQCSAS
FEEVTLRFLDAGERDALRAYLISRLEKTRKGELTQRMILATWLVEFYLSKCNELDDVVAS
ESVSHDVENLETERKIVEEDLKNFFVTYKANLDPQTVYDLIQGHGRTDMYIYYATTIGDY
DRVIEHWILEEEWIKAIDVLNRQTDLELYYRFSPVLVRHAPKDTVESWLRQPALEPLRLV
PALLRLQHLPRDPLVGNQAIRYLNHVIFEQQNTSSIIHNLLITFYAAPSPSLQPSPDEDG
PLLKFLSNAPTDPMTGKPYYDLDYALRLCKQANRIQPCVHIYSKMGLWENSVDLALAKGD
LELAQINADMPDNDLQLRKKLWLKIAKAMRFLENTDLLKVEDILPFFPDFVVIDDFKDEI
CNALEGYAAHIETLKGEMDEATRNAEAIKQDIAALRNRFVTLDAGECCSTCGQLLFTRQF
YVFPCQHTFHADCLIGLAKEYLPAHALRRILALQNELMKNTQKSVDRSTITTPTVVSPGG
QGPRQPLSQRTLLSANFTNLTNPLQNGTRTANAIGRNLLSAGDRLRDLIVPDALASVVSA
PGWIPGMGGKKTETEKDGGKKTEKLRAELDEVLASSCPLCESVVVGLDKPFVKEGEMDSS
WEL
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgaattcgttgaacacgctgctgcgcccaacgggggacttggccatggcgcg
tccgcccttccgcaagtccagtatgagggatttgagccttcgccttacgaacgagatgac
tttcgagaagagttcgaagaggcggccttgggggaagagaccgaccctgccgctgctgca
ggccctgtattcgagcttgggcgggtccaatacaccttaccagcaccattagtttccatg
gcagtatcctcggacgtcctcgccatggctttggcatcaaataccatcgtcctcattgcc
ctcgcccatgccgatcaagtcatgaagatccaaattcctcggaagaccaatgagatgtcc
gtatccaagatattcatggacccttccggccgacacatcatagtaacgtctccgcaagga
gagaactggtatctataccggacttggaagaagccccggcaactgaagggtttcaagatg
gtcattgagagcatagcctggaataaagctgccctgctctcgtctcattcgacgtcgacg
cgggagatgctcatcggtgcgagaaatggcacaatatacgaagctgttcttgacgcagaa
gaggacttcttcaagtctcaggaacggtatttgcagtcgctattctctctgcccgagcgg
catccggtcactggcatcaagtttgacttgtttccggcctctgatccaagacgagcattg
gttatcgttactacgccttctcgaatataccagttcgtcggggtcccggatagacggact
gaggagggagggcggatcttctccaacttgttcgcgagctacagagatgttgcaccaacc
atttttgagattcctggcggtttagaccattcagaactccatgtctatactcctgacgcc
gagcaagtcttatcgctgcccaagactatggcatggatggcctctctcggaatctaccat
ggcactctgaacttcgagtcaacgtcagacaacttgattgacaatgctcagatgctcccg
tatccgtccctgtctggtctttcccctcaagagtggcccaaatcaatagctctaacagag
ttccatttcctcctcctctacaaggaccgggtggcggccatctgtaacctggatgagaag
ctgtcatacgaagagatgctgcctttgaaaccaaacgaggaggtgaagggactggctgca
gaccctgtacgtaagacgtactgggtatacaccgaccagtctctattcgaactggtggtt
ggcaacgaagaccgggatgtctggaaggtctatctagagagaggtcaatatgatctgtcc
ctacggtatgcgaagacagcacgacaaagggatcgggtcttgtcagcgcatgccaatgcc
ttattcaacgaaggaaggtacttccaagctgcacaagcttactcccagtgctctgccagc
ttcgaagaggtcactctcagattcctagacgcgggtgaacgcgatgccttacgggcctat
ctcatttcgcgcctagaaaagacccggaaaggcgaactgacgcaacgcatgatcctggcg
acctggctcgttgagttctacctcagcaaatgtaacgagctcgacgacgtcgtcgcttcg
gagtctgtctcgcacgacgtggagaacttggagacagaaaggaagatagtagaggaggat
ctgaagaacttctttgtgacatacaaggctaacttggacccccaaaccgtctatgatctt
attcaaggccatgggcgtactgacatgtatatatactatgcgactaccattggcgactac
gaccgagtgatagaacactggatccttgaggaagagtggatcaaggctatagatgtcttg
aaccggcagacagatctcgaattgtattatcggtttagtcctgtccttgttcggcacgct
ccgaaagacacagtagaatcgtggcttcgacagcctgccctggaacctttgcggcttgta
cctgctctcctgcgactccagcatctccctcgcgacccgctcgttgggaaccaggctatc
cggtatctcaatcatgtcattttcgaacagcagaacacgtcctccatcattcacaatctc
ctgatcacgttctacgcagctccctctccttcattacagccttctccagacgaagatggc
cctctactgaaattcctgtctaatgcacccacggatcctatgaccggcaaaccctactat
gacctggattatgccttgcgactatgcaagcaggccaatcgtatccaaccatgcgtgcac
atctactctaagatgggtctatgggagaatagcgtcgatctggcgcttgctaagggagac
ctggagcttgctcagatcaacgcggacatgcctgacaatgacctgcaactgaggaagaaa
ctgtggctcaagattgccaaggctatgcgcttcctggagaacactgaccttctgaaggtc
gaggatatcttgccattcttcccagatttcgttgtcatcgacgacttcaaggacgagata
tgcaatgctctggagggttatgcagcccacatcgagaccttgaaaggcgagatggacgaa
gcaacccgcaacgcagaagccatcaaacaggacatcgccgcgctgaggaaccggtttgtc
accctggatgcgggagaatgctgttcgacatgcggccagctcttgttcacaagacagttt
tacgtcttcccgtgtcagcatactttccatgccgattgtctcattggtctggctaaagaa
taccttcccgcgcatgccttgcgccgcatcttagcccttcagaatgagctgatgaagaac
acgcagaagtcggtcgatcgatccacaatcaccactccgactgtggtttctccaggcgga
caagggcctcgacaaccactttcgcagcgcacactgctatctgctaatttcaccaatcta
acaaacccgctacaaaacggtacaagaacggccaatgccattggcaggaatctactttcc
gctggtgatcgcctgcgggatctgatcgtacccgacgctctggcttccgttgtttccgcg
cctggctggatacccggtatgggggggaagaagacggagaccgaaaaggacgggggcaag
aagacggagaagctgcgagctgagttggacgaagtgctagcgagcagctgtccgctctgc
gagagcgtggtagttggcttggataagcctttcgtgaaggagggcgagatggattccagc
tgggaactgtag
DBGET
integrated database retrieval system
