Gloeophyllum trabeum: GLOTRDRAFT_102971
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Entry
GLOTRDRAFT_102971 CDS
T03130
Name
(RefSeq) vacuolar assembling protein VPS41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04138
Autophagy - yeast
gtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
GLOTRDRAFT_102971
04148 Efferocytosis
GLOTRDRAFT_102971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_102971
Membrane trafficking [BR:
gtr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
GLOTRDRAFT_102971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_WDHD1_1st
Vps39_1
WD40_CDC20-Fz
WDR55
Beta-prop_HPS5
zf-RING_Vps41
EIF3I
zf_RING_Vps8
WD40_Prp19
zf-RING_5
zf-RING_2
Beta-prop_TEP1_C
Beta-prop_EML_2
WD40
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
19298535
NCBI-ProteinID:
XP_007861982
JGI:
Glotr1_1_102971
UniProt:
S7QG26
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MNKPMNGTDGIAETASPQGTDGESDEEERSGDEQGESEGHGRDEEREGQEDEDDDEDEDE
EEDEDEEPALKYERLGGVVPDLLQKDSASALTISNKLLTLGTHSGIVHILDMSGKRIKSY
KPHLASVIDIGMDTTADFVATASMDGQVVIHSLSTPEQYLFDMKRPMRTVSMEPNFAKKS
TRAFVCGGMAGSLVLHEKGWLGHKETVLHSGEGPIWNVRWRDRLIAWANDLGVKIYDTVS
QSRITFIDRPPDSPRADLFKCTLHWQDNSTLLIAWADHIKVARIRARPRSPTSPANLPPL
LVEITAVFKLDCMIAGIVPHPLASPTCAVHPSVSAHSRAPSASGRSTPSGHAQNSAPTTV
PALTTFLVLAYTPPDMSFLEEATDDRTRQARKAAERPELRIISRAGEELSADLLSIQGFE
KWACNDYVLTAVDSEGLDTVRDRAYVVLSPKDLVIVRSRDRRDHIAWLVERERYEEALEE
VEHLGVDEAGQGEGAVDAVEIGQRYIEHLVVEGDFVKAAKLCPKVCGQDAKRWEDWIFVF
AQKRQMQTIIPYVPTESPKLSHLVYEMVLAYFLTHDRNALLQTIKDWPRGIYDISAVIVA
VQSELDKAPSTSTAARTAPEAAILMECLAELYTANRQPGKALPYLLRLRRPNVFDLIREN
NLFTAVQDQVLLLVEFDQEVIEKRRKDGYEVDDSESTAIQLLVDHTHSIPIGRVVQQLQS
RPYYLFLYLDALFKKDPFLASDFADAQVPLYAEYAPGRLIDFLRASNYYSLEKAYNVCKE
RDLVPEMVFLLGRMGNNKQALNLIIERLGDVSRAIDFAKEQNDDDLWEDLLKYSETRPTF
IRGLLENVGAEIDPIRLIRRIKNGLEIPGLKEALIKILQDFNLQISLLDGCQRILEGDCA
DFARRLQRDQNSGFFLSAKTLCPICSKPLQRFPQSLVLLFLCRHIVHATCASGGDALPQQ
PDHGLAGLALGGGRSLSGKIAFTAIVRAKVDQGCPVCHKKDEGERT
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccgatgaatggtacagacggtattgctgagacggcaagtccgcaaggcaca
gatggtgagtcggacgaagaggaacggagcggggatgaacagggtgagagcgaagggcat
ggacgggacgaagagcgggaggggcaagaagacgaggatgacgacgaagacgaggatgag
gaggaagatgaagacgaggaacctgctctgaagtacgaacgacttggaggagttgtcccg
gaccttctgcagaaggattccgcgtctgctctgacgatatccaacaagttgctgaccctg
ggcacacacagcggcatagtgcatatattggatatgtctggaaagaggatcaagtcctac
aaacctcatctcgcatcggtcatagacatagggatggataccacagcggactttgtggct
acggcatctatggatggacaggttgtcatacattcgctctctacgccggaacaatacctg
ttcgacatgaagcggccgatgcggacggtcagcatggagccaaactttgctaagaagagc
acgcgggctttcgtttgtggtggtatggccggctctctcgtactgcacgagaaaggttgg
ttaggacacaaggagaccgtgttacacagcggggaagggcctatttggaatgtacggtgg
agggaccggctgatagcctgggccaatgacctaggcgtcaagatctacgacactgtttcg
cagtcacggattaccttcatcgaccggccaccagatagtccccgtgctgatctatttaag
tgcaccctgcattggcaggacaattccactctcttgatagcatgggcagaccacatcaaa
gtcgctcgtatccgtgcccgtcctcggagccccacctcccccgccaatctccccccgctt
ctcgttgaaatcaccgctgtcttcaaactggactgcatgatcgcaggtatcgtaccccat
ccactagcttcccccacttgcgctgtacacccctctgtatccgctcattcccgcgccccc
tctgcctctggacggagtacgcccagtggtcatgctcagaattctgcgcctactactgtg
cctgccctcactaccttcctggtcctcgcgtacacgcctccggacatgtctttcttggag
gaagcgacagacgaccgtactcggcaggctcgcaaagccgcggaacgccctgaattgcgc
atcatctcccgggccggcgaggagctctcagcggatctacttagtatacaaggattcgag
aagtgggcctgcaacgattatgtacttaccgcagtcgatagtgaggggctagatactgtg
cgagatcgggcctacgttgtgctgagcccgaaggatctggtcattgtcaggtcgagagat
agacgggatcatattgcgtggttagttgagagagagcggtatgaggaagcacttgaggag
gtggagcacttgggggtggacgaggccggacaaggggagggcgccgttgatgccgtggag
attggacaaaggtacatcgagcatctcgtggttgaaggcgacttcgtcaaggctgcaaag
ttatgtccaaaggtttgcggccaagacgcgaagcgttgggaagactggatctttgttttc
gcacagaaaagacagatgcagactatcattccatatgtgcccacagagtcgccgaaacta
agccatttggtgtacgagatggtactcgcttatttcctcactcacgatagaaatgctttg
ctgcaaacgatcaaagactggccaaggggtatatatgacatctccgctgtcattgtcgct
gtccaatcggagctcgataaggcaccatctacatcgaccgccgctcgcacagctcctgag
gcagccatactcatggagtgcctagcagagttgtatacagcgaacagacaacctggcaaa
gccctgccgtatctcctgcgcctgcgccgcccgaacgtgtttgacctcatcagggaaaat
aacttgtttacggctgtgcaggaccaggtactgttgctggtcgagtttgaccaggaagtg
atcgagaaacgaaggaaagatggctacgaggttgatgactccgagagtactgccatacag
ctgcttgtcgaccatacgcactccataccgataggcagagttgtacagcagttgcagagc
cgcccttattacctcttcctctacttggacgcactgttcaagaaggacccattcctagcg
tccgatttcgcagacgctcaggtgcctttgtacgcggagtacgcacccgggcgactcatc
gacttcctgcgtgccagcaattattacagtttggagaaggcatacaacgtttgcaaagaa
cgtgatcttgtcccagagatggttttcctcctgggccggatgggcaataataagcaagct
ctcaacttaatcatcgagagacttggcgacgtcagccgggctattgattttgcgaaagag
cagaacgacgacgacctatgggaggatctcttgaagtactctgagacacgacccactttc
atacgtggtctcttagagaacgtcggggcagagatagatcccatccgtcttatacggcga
atcaagaatggcttggagatccccggtttgaaggaagccctgatcaagatcctccaggac
ttcaaccttcaaatctctctgctggacggatgtcagaggatcttagagggagattgtgca
gatttcgctcgccgattacagagggatcagaacagtggattcttcttgtccgctaagact
ctctgtccgatatgttcgaaacctttgcagaggtttccgcaatcattggtattgctattc
ctttgccgacacatcgtccacgccacgtgcgctagcggtggtgatgcccttcctcagcag
ccggatcatggtcttgccggtctggctttgggcggcggacgaagtcttagtggcaaaata
gcatttacggctattgttcgagcgaaggtggaccagggatgtccggtttgtcacaagaag
gatgaaggcgaacggacatga
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