Gloeophyllum trabeum: GLOTRDRAFT_104017
Help
Entry
GLOTRDRAFT_104017 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_104017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_104017
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_104017
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
GLOTRDRAFT_104017
Spliceosome [BR:
gtr03041
]
Complex B
Other components
Prp19-related factors
GLOTRDRAFT_104017
Complex C
GLOTRDRAFT_104017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
TPR_12
TPR_16
DALR_1
TPR_NPHP3
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
19298616
NCBI-ProteinID:
XP_007863836
JGI:
Glotr1_1_104017
UniProt:
S7QHT5
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MPSVDKKDAPSVETLAALFPLTFPVPTPATHPDLISTKDVNREEDLLRNPQSFRHWWNTI
QNAREAFNAVQKTERLDVSDEVAAVLGPLASPTARKALQRLTYLYEAALVQFPGMFKLWK
SYLQTRMYYVLGKPVVRRRAGGKKKFPEMKEALEDEQDDLERWEGGLDGIVGWEEWKSLI
ATFERALMWLPKMPRLWLMYLSIFNHPMCPPPISHSHCRRTYDRALRTLPPSLHHRIWVR
YLLWAEAKGGSTMVAVYRRYLAVDPSVTEHYTSLLLAPENPSPRPLEAAKLLLSLSRKAA
RGEYTSPEGKSPYQLLTEWLEVVEQYAEEVGLDVSDTIENHRVEEEAEAAAVDAEPASTE
GNLIRFGGPAVPVSADGKPGTPYDEDEDPASPRKLNIERIVHRDGLEVYRDQAGRLWSGL
ATYWIKRGEFERAKATFEAGMAEVVTIRDFTQIFDAYAEFSESLISAMMESIANPDEDED
EEDVQETEAELDTRMKEFEELMDRRPFLVNDVLLRRNPNDVQEWEKRIALWGNDDEKVAE
TYTKALETINPRRATANLYRLYVNFAKFYEEGGTQGQAEPDLDSARKILEKATKVNFKTV
EDLAEVWCEWAEMELRQENYDEAIRVMQRAAAIPKNTKVNYHDHSLPVQMRLFKSLKLWS
FYVDLEESLGTVESTKAVYDKILELRIANAQIIVNYAAFLEEHSYFEESFKVYERGVELF
TFPISFEIWNIYLSKFVKRYGGSKLERARDLFEQALEKCPPKSCKPLFLMYAQLEEEYGL
AKRAMAIYDRATQVIADEDKFEMFTLYIAKAAANYGLPATRPIYERAIEILPNRQTAQMC
LRFANLERKLGEIDRARAIYAHASQFCDPRLHPEFWAEWNAFEIETGSEDTFREMLRIKR
SVQAQFNTEASYLAAQTMATKKNSTQSPDAETADAADPMVAVERQAGGVKGAPAFVASKH
NVNITESQAEETTTQVNADEIHISDDED
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggttgacaagaaggatgcgccctccgtagaaaccctagccgccttgttccct
ttgacgttccctgttccgactcctgccacgcatcccgaccttatttcgacgaaagatgtc
aaccgagaggaggacttgttacgcaaccctcaatccttccgacactggtggaatactatc
caaaacgcaagagaggccttcaatgctgtccagaagacggaacgattggatgtatcagac
gaagtagccgctgtactaggccctctcgcttcacctaccgctcggaaagcccttcaacgt
ctcacttacctctatgaggctgctctcgtccagttccctggcatgttcaagctatggaag
tcgtatctccagacgcgaatgtactatgtcctaggcaagcctgtggtccgtaggagggcc
ggaggtaaaaagaagttccctgaaatgaaagaggccctcgaggacgaacaagatgacttg
gaacgatgggaaggtggattggacggtatagtgggctgggaagagtggaagtcgctgata
gctacgtttgagagagcattaatgtggctacccaaaatgccaaggttatggctgatgtat
ctctctatattcaatcacccgatgtgccctcctcccatctcccactcccactgtcgacgt
acctacgaccgtgcactgcgaacactacctccctctctccaccatcgtatatgggtccgc
tatcttctctgggcagaggccaaaggcgggtcgacaatggtcgcggtataccgtcgttac
cttgctgtcgacccctcggtgacagaacactatacatctcttctattagcaccggagaac
ccctcacctcgtccattagaggcagcgaagttgctactgtcactgtcacgtaaggcggcg
cgtggagaatacacgagtcctgaaggcaagagcccataccagttgttaacggaatggctg
gaagttgtcgagcaatacgccgaagaggtcgggcttgacgtgtcagacacaatcgagaac
caccgggttgaagaagaggctgaagctgcagccgtggacgcggagccagcttcaactgaa
ggcaacttgattcgatttggcggaccggcagttcctgtgtcagccgatggcaagcctggt
actccctatgacgaagatgaggatccggctagtcctaggaagctcaacatagagcgcatt
gtccatcgggacggtctggaggtatacagagaccaagctggacgactatggagcggactg
gcgacgtactggatcaagcgcggcgagtttgaacgggccaaggctaccttcgaggcggga
atggcagaggtcgtgaccatccgagacttcacccaaatattcgacgcgtacgcagaattc
agcgagtcgctgatcagtgctatgatggagagcatagccaatcctgacgaggacgaagat
gaagaagacgtccaggagacggaagctgaactggatacaaggatgaaggagtttgaggag
ctcatggaccgccggccgtttttggtaaatgatgttttattaagacggaatccaaacgac
gtccaagaatgggagaagcgaatcgcgttgtggggtaacgacgatgagaaggtcgccgaa
acctatacgaaagcgctcgagaccatcaatcctcgcagggccacggcgaatttatacaga
ctctatgtcaactttgccaaattctacgaagagggaggtacgcagggccaagcggagcct
gaccttgacagtgcccgtaaaattctcgaaaaggctaccaaggtcaacttcaagacagtg
gaagacctggcagaggtgtggtgcgaatgggcagaaatggagctgcggcaagagaattac
gatgaagcaattcgagtaatgcaacgcgccgccgctataccgaagaacaccaaggtcaac
taccatgatcactctcttcctgtccagatgcgtcttttcaaatccctcaagctttggtca
ttctacgtcgatctcgaggagtctcttggaacggtcgagtccacgaaggccgtttacgac
aagatcctagaattacggatagcgaatgctcagatcatagtaaattatgccgctttcctt
gaggaacacagttactttgaggagagtttcaaggtttacgagcgaggagtggaattattt
actttccctatctccttcgagatctggaatatctacctctctaaatttgtgaagcgatac
ggtggctcaaaactcgaacgagcgcgtgacttattcgagcaggccctggagaagtgtccg
ccgaagtcgtgcaagccgctcttcctcatgtacgcccagctggaagaggagtatggcctc
gcgaaacgtgccatggccatatatgatcgcgcgacgcaagtaatagcagacgaggacaag
ttcgagatgttcacgctatacatcgctaaagccgcggccaactacggacttccagcaacc
cgaccgatatacgagcgtgccatcgagattcttccgaaccgtcagactgctcagatgtgc
ttgcgctttgcaaacctagagcgcaagctcggcgagatcgaccgtgcccgcgccatctat
gcccatgcttcgcaattctgcgatccacgattacatccagagttctgggcagagtggaat
gctttcgagatcgaaacgggctccgaggataccttcagagaaatgttgcggatcaagcgc
agcgtacaagcccagtttaatacggaagcatcgtacctggctgcgcagacaatggcaacg
aagaagaacagcacacagtctccagatgctgagacagcggatgcggctgatcctatggtg
gctgttgagcggcaggccggcggtgtgaagggagcgccagcgttcgtggcttcaaaacat
aatgtcaacataacggaatcgcaggccgaggaaaccacaacgcaggttaatgcggatgag
attcatatatcggacgatgaagattag
DBGET
integrated database retrieval system
