Gloeophyllum trabeum: GLOTRDRAFT_106125
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Entry
GLOTRDRAFT_106125 CDS
T03130
Name
(RefSeq) SWI-SNF chromatin remodeling complex, Snf5 subunit
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_106125
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_106125
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
GLOTRDRAFT_106125
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
GLOTRDRAFT_106125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
19298755
NCBI-ProteinID:
XP_007866723
JGI:
Glotr1_1_106125
UniProt:
S7Q4I0
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MPAPPPPLRSNVAPSPLPTQTQALHTTYPSRLRTGATLLMQPILTPNTTPGAATTTRSRR
GAVINYADPGSGDDIPDAGAIESDDSDFVASGGLRSAVRATRGGGSRANAGMGVFHSGAS
TPVPGQQSHGAQGKAELDQSYLGAIPPARFINAKAVAPTKHEYFAEGQLAQQAQKPTSLV
PIRVEFETDTHRIRDCFVWNLHEDLIKPETFARIFCTDLDLPHVPWVETVANQIRAQLED
HGDVAAMDLDVDEQHADEIPECRVILSIDVQVGNYHLIDHIEWDLLSSLTPEAFAQTLCA
ELGLSGEALPLIAHAVHEELVKHKKDAIEWGVIGLEREKEAEEHAADKPRDKSGLSLLKD
KTGLGLGWGRAPKDGRGPKTLRSVWRDWNEAEEFATRFEVLTAEEVERREIERERASRRL
RRETSKFQSSLIATRRRR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccccgccaccgcccctgcgatccaatgtcgcaccgtcccccctccccacacag
acccaagccctgcacacaacctacccctcgcgtctgcgcactggcgcgaccctcctcatg
cagcccatcctcacacccaacaccacgcccggcgcagcgaccacgacgcgctcacgccgc
ggcgccgtcatcaactacgcggaccccggatcgggcgacgacatccccgacgcgggcgcc
atcgagagcgacgactcggactttgttgcgagcggtggattaaggtccgcggtgcgcgcc
acaagggggggagggagcagggccaatgcgggtatgggggtcttccacagtggtgcgtcg
acgccggtcccggggcagcagtctcacggggcacagggaaaggccgagttggaccagagc
tatctaggggcgattccgccggcgcgatttatcaatgctaaggcggtggctccgacaaag
catgagtatttcgccgaaggtcagctagcacaacaagcacagaaaccaacatcactcgtg
cccatccgcgtcgaattcgaaaccgacacccatcgaatacgtgactgcttcgtgtggaac
ctgcacgaggacctcatcaagcccgagacatttgcgcgcatcttctgcaccgacctcgac
ctgccgcatgtcccctgggtcgagaccgtcgcgaaccagatccgcgcgcagctcgaagac
cacggcgacgtcgccgccatggacctcgacgtggacgagcaacacgccgacgaaatcccc
gaatgccgcgttatcctcagcatagatgtgcaggtcggcaactaccacctcatcgaccac
atcgagtgggacctgctctcgtcgctcacgcccgaggcgttcgcacagacactgtgcgcg
gagcttgggctgtcgggcgaggcgctgccgctcatcgcgcacgcggtacacgaggagctc
gtcaaacacaagaaggacgcgatcgagtggggtgtgatcgggctggagagggagaaggag
gcggaagaacacgctgcagataagccgagggataagagcgggttgagcttgctgaaggac
aagacgggcttgggcctcgggtggggccgcgcgccgaaggacgggaggggaccgaagacg
ctcaggagcgtttggagggactggaacgaggcggaggaatttgcgacgcggtttgaggtg
ctcaccgccgaggaggttgagaggagggagattgagagggagagggctagtcgccggcta
cggagagagacgtcgaagttccagagcagtctgattgcgacgcggcgcagacggtag
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