Gloeophyllum trabeum: GLOTRDRAFT_107280
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Entry
GLOTRDRAFT_107280 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_107280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_107280
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_107280
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GLOTRDRAFT_107280
Spliceosome [BR:
gtr03041
]
Complex A
U2 snRNP components
U2 related factors
GLOTRDRAFT_107280
Complex B
GLOTRDRAFT_107280
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
GLOTRDRAFT_107280
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
Helicases
GLOTRDRAFT_107280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
T2SSE
ATPase
OB_NTP_bind
AAA_23
AAA_14
AAA_30
ABC_tran
PhoH
AAA_7
FtsK_SpoIIIE
AAA_16
Myosin_head
Motif
Other DBs
NCBI-GeneID:
19298833
NCBI-ProteinID:
XP_007868503
JGI:
Glotr1_1_107280
UniProt:
S7Q133
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MATDNPYLAHLKPKRGGKSKQIVDNPLHGLLARRVTGEQVREALESDVNPFTMQSHTPQH
KKILEARKKLPVYSQMDEFLKIFSKNQIIIIVGETGSGKTTQIPQFVCYSDLPHTKGKMV
ACTQPRRVTALSVAQRVADEMDEPGTTFLNYMTDGMLLREAMNDPDLTRYSTIILDEAHE
RTLATDILMCILKTLAKRRSDLKRIVMSATLDALKYQKYFSPKHGEVVPLFKVPGRTHPV
EVFYTQEPEPDYVEAAIRTVLMIHRPEEPGDILLFLTGEEEIEDACRRIKIKADELTSQD
PDNIGPFICIPLYSSLPPQQQQRIFDPPPPTRTPDGPPRRKVVISTNIAETGLTIDGMVY
VIDPGFSKQKVYNPRIRVETLLVSPISKVSAKQLAGRAGRTRPGKCFRLYTERDFMKELD
EQTHPEILRSNMASILAKMFIVSPEFKCSNEILTIVTMLSVQSVWMQPPSQRTEADPAKH
MLTLRGGDHLTLLNIHTKYGANGQDKNWCWKNFVSARALQEVDNVRLQLQCIMEKFDIDL
VSTGDSNKSYAAIRMALVCGFFMQVAHKEGEKGSYLTLWRRETGLKSTGIFVR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgacaatccgtacctggcgcacttgaagccgaagagagggggcaaatcaaag
caaatagtggacaatccactgcatggtcttctggcccggagagttactggcgagcaagtc
cgcgaagccttggaatccgatgtcaaccccttcacgatgcagtcccatacaccgcagcac
aagaagatcctcgaggcacggaagaagctgccggtgtactcgcagatggacgagttcttg
aagatattctctaaaaatcagatcattatcatagtgggcgagacgggatcagggaagacg
acgcaaataccccaattcgtatgctactcggatttgccacatacgaaaggaaagatggtc
gcttgtacgcagcctcggagggtgactgctttgtcggtagcgcagcgtgtagcggatgag
atggatgaacctgggacaacatttctgaactacatgaccgatggtatgctactccgggaa
gcaatgaacgaccccgatttgactcgctactccactatcatccttgacgaggcccacgaa
cgcacacttgcaacagatatcctcatgtgtattctgaagactctcgcaaaacgtcggtca
gacctaaaacgcatcgtgatgtctgctaccctcgacgcactgaaatatcaaaagtacttc
tcgcccaaacacggtgaggttgtcccgctgttcaaagttcccggtcgcacacaccccgtc
gaagtcttttacacgcaagagcccgaaccggattacgtagaggccgccatccgcaccgtg
ctcatgatacaccgccccgaggaaccgggagacatcctcctgttcctgaccggcgaagaa
gagattgaagatgcctgcaggaggatcaaaatcaaggctgacgagcttacgagccaagac
ccagacaacattgggcccttcatctgcatacccctctattcctccctcccgccacagcaa
cagcagcgtatctttgacccgccgccccccactcggactcctgatggcccgccacggcgc
aaggtcgtcatctctactaatatcgcggagaccggtctgaccatagacggcatggtctac
gtcatcgatcctgggttttcgaagcagaaagtgtacaacccgcggatacgcgtagagact
ctgctcgtaagcccaatctcgaaggtgagcgcgaagcagctggctggacgagccgggcga
acgaggccgggcaagtgcttcaggctgtacaccgagcgcgatttcatgaaggaacttgat
gagcagacccacccggagattctgcggagcaatatggcgagcattcttgccaagatgttc
atcgtaagcccggagttcaagtgtagcaacgagatcttgaccatcgttacgatgctttca
gtccaaagcgtctggatgcagcctcccagtcaaagaacagaagcagaccctgcgaagcat
atgctgactttgcgtggcggcgaccatctgacactgctcaatatacacaccaaatatggt
gccaatggtcaggacaaaaactggtgttggaagaatttcgtctctgctcgtgctctgcaa
gaggtggacaatgttcgcctgcagttacagtgcatcatggaaaagttcgacatcgacctg
gtctccacaggtgactcgaataaatcctacgccgccattcggatggcgcttgtctgcggg
ttcttcatgcaggttgcacacaaggagggtgagaagggcagttatctaacactctggagg
cgtgagaccggtctaaaatcgaccggtatattcgttcgctag
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integrated database retrieval system
