Gloeophyllum trabeum: GLOTRDRAFT_108853
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Entry
GLOTRDRAFT_108853 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GLOTRDRAFT_108853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_108853
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
GLOTRDRAFT_108853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
CSTF_C
Voldacs
Motif
Other DBs
NCBI-GeneID:
19298948
NCBI-ProteinID:
XP_007860681
JGI:
Glotr1_1_108853
UniProt:
S7QLI0
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MDEDDDAYLYGDPTDAGQSTTVETSVPQPVPLEKAQPANGVLAQLEANVKEENADEEEED
RGDMGDEDEDEGDESEDDIEIIMEPANRSLDFRQNRPSVTRTLSASVSTPTKPGPPAPSL
TTEYTPRERGDPLNKSLTSRSTPQATPQPTSISSQSQPPESQPQEQKQADDGPDPNTLPP
AHAPPSHPSINPSLPGTIDGRSIFEYDIQAMAEKPWRRPGSDISDWFNYGFDEVSWEAYC
YRRREMGDVASSLKANILNFAGMPEEQIAALPPEVRTMIMANVASMMPGGGPNPAMMQAG
MGMNPMMHPDMSGMMGMGMGDMGNMGNMGMGMQGPGQMMQEGMVPGAAGATPEQGGPGMG
MGEGFGAGGPGAGMMGMGMGGEFGMQGMQDQTGMGQQMYPGMEGSGTPGPGPSQGPSSGP
VQTPTPIPAAPRGPATPVSYRGRPMQQGMGVRGMRGGYGMGRGRGHAPQNLPVRPASPLP
PNVPTGPRNQKYRDKDANAPAVDGLDYGGGGGGAHRDNATPDDDRGSRKRRGSPNGDDRS
SKRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatgatgacgcctacctctacggcgacccgacggacgccgggcagtctact
accgttgagacttctgtgcctcagccggttcccctagaaaaggcccagcctgcaaacggt
gtcttggcccaactggaagcgaacgtgaaggaagaaaatgcggacgaggaggaagaagat
cgcggggacatgggtgacgaggacgaagatgagggggacgaaagcgaagatgatatcgag
attattatggagccagctaatcgctcacttgacttccgacaaaaccgtcccagcgttacc
cgcactcttagtgcaagtgtgagcactcccactaaaccgggcccaccagcaccatcactt
acgacggagtataccccacgagaacggggtgaccctctcaacaaatcgttaacctccagg
tccactcctcaagcaaccccacaaccgacgtcaatatcctcccagtcccaacccccagaa
agccagccccaagagcagaaacaagcagatgacggacctgacccgaacacacttccccct
gcacatgcgcccccatcccatccctctatcaatccgtcgctgccaggtaccatcgatggc
aggtcaatcttcgaatatgatatccaggctatggcggagaagccctggagaagacccggc
tcggatatcagtgactggttcaactatggcttcgatgaggtatcatgggaagcttactgc
tatcggaggagagagatgggagacgtcgctagctctctcaaagcgaatatcttgaacttc
gctgggatgccggaggagcaaatcgctgcccttccaccagaagtccggacgatgatcatg
gcgaacgtcgcttccatgatgccaggcggcggtcccaaccccgccatgatgcaggcgggc
atgggcatgaatcccatgatgcacccagacatgtcagggatgatgggaatggggatgggt
gacatgggcaatatgggcaatatgggcatgggcatgcaaggacctggccagatgatgcag
gaaggcatggttccgggggcagctggtgcgacgcccgagcagggcggacctgggatgggt
atgggtgaaggattcggtgccggtgggccgggtgcaggtatgatgggtatgggtatgggt
ggagaatttggcatgcagggcatgcaggatcagaccggcatgggccaacagatgtaccca
gggatggagggcagcggcactcctggccccggccctagccagggtcccagttctggacct
gtgcaaactccgactcccattcccgccgcaccacgaggtcccgccactcctgtatcgtac
cgaggacgacccatgcagcaaggcatgggagtgcgtggcatgcggggtgggtacggtatg
gggagaggtagaggccacgcacctcaaaaccttcctgttagaccagcctctcctcttcct
ccaaacgttcctacaggaccgaggaatcaaaaatatagggacaaggatgccaatgcacct
gctgtcgatggtctagactacggcggaggtggaggtggggcacatagggacaatgcaaca
cctgatgatgacagagggagccggaagcgcagaggctcgccgaatggcgacgacaggagc
tcgaaacggcgctag
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