Gloeophyllum trabeum: GLOTRDRAFT_110574
Help
Entry
GLOTRDRAFT_110574 CDS
T03130
Name
(RefSeq) endo-polygalacturonase PG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr00040
Pentose and glucuronate interconversions
gtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GLOTRDRAFT_110574
Enzymes [BR:
gtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
GLOTRDRAFT_110574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
DUF1565
DUF473
Motif
Other DBs
NCBI-GeneID:
19299245
NCBI-ProteinID:
XP_007864540
JGI:
Glotr1_1_110574
UniProt:
S7QDH7
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSILVLILSVLLGYALAANVPRSSDCVGTIASLDDVAAAQECSTVNIEGFTVPAGEGFTL
SLIDGATVNLQGDVLFGNMSWTGPLFTISGNDITFNGNGHRFDGGGPFYWDGLGSNGGIT
KPRPMLKIKMSGRFSDLYVVNSPAQTFSVSNPGPLVISSVTVDDSQGDYPNAQSNGLAAG
HNTDGFDVSTTDLTIENRSVHNQDDCIAINEGSNIVFTNNVCTGGHGISIGSITSNRTVS
GVVISNNHIANEQQAIRIKTDAVATNSSVSNITYSGNTATNLTKFGILIDQSYPSTLGVP
GAGVKISNINFIEAESIISVASGADRVAVNCAVGGCLGTWDWSSLTVSGGKAGPINNFTG
IEGFSQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatactagtgctgatcttgtcggtcctcctgggttatgcacttgcggcgaacgtg
cctcgcagcagtgactgcgtcggcaccatagcgtcgttggacgacgttgctgctgcccag
gagtgctcgaccgtgaacatcgaaggattcactgttccggccggtgaaggtttcaccctg
tctctcatagacggcgcgactgtgaacttgcagggagatgttttatttggcaatatgagc
tggacggggcccttgtttactatcagcggaaatgatattactttcaacggtaacggccac
aggttcgacggaggaggacccttctattgggatggtctgggttcgaatgggggcataacc
aagccgcgtcccatgctgaagatcaaaatgtccggcaggttctctgacctctacgttgtc
aactcgcctgcccagactttctcagtttccaacccgggtcctctggtcatttcttctgtt
accgttgacgactctcaaggagattatcccaatgctcaaagcaacggtctggcggcaggg
cataatacagacggattcgacgtcagcactactgaccttacgattgaaaacaggtcggtt
cacaatcaggatgattgcattgccatcaacgaaggctccaacatcgttttcaccaacaac
gtctgcacgggtggccatgggatatctattggttcaatcacctcgaaccgcaccgtatcc
ggcgtagtaatctccaacaaccacattgcgaacgaacagcaggcgatccgcatcaagaca
gacgcggtggcgacgaatagcagcgtgtccaatatcacctacagtggcaataccgccaca
aacttgacgaagtttggcatactcattgatcagagttaccccagcaccctcggcgttcct
ggtgctggggtgaagatctccaatatcaatttcatcgaggccgagtctatcatctccgtg
gccagtggggctgaccgcgttgccgtcaattgcgcggtgggaggttgtctaggtacttgg
gattggtcgagcttgacagtcagcggtggtaaagctggacctatcaacaactttactgga
attgaaggtttcagtcagtaa
DBGET
integrated database retrieval system