Gloeophyllum trabeum: GLOTRDRAFT_111878
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Entry
GLOTRDRAFT_111878 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_111878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_111878
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_111878
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GLOTRDRAFT_111878
Spliceosome [BR:
gtr03041
]
Complex A
U2 snRNP components
U2 related factors
GLOTRDRAFT_111878
Complex B
GLOTRDRAFT_111878
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
GLOTRDRAFT_111878
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
Helicases
GLOTRDRAFT_111878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
ATPase
nSTAND3
Flavi_DEAD
ABC_tran
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
19299465
NCBI-ProteinID:
XP_007868447
JGI:
Glotr1_1_111878
UniProt:
S7Q0C9
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MATDNPYLAHLNPKKGGKSSASPTPGNNPLYGFLPRRVTGEQARKALESDVNPFTMQPHT
PQYKKILEARKKLPVYSQMDEFFKIFSENQIIVMVGETGSGKTTQIPQFVCYSDLPHTKG
KMVACTQPRRVAAMSVAKRVADEMDVQLGKQVGYSIRFEDMTEPGTTFLKYMTDGMLLRE
AMNDPELTRYSTIILDEAHERTLATDILMGLLKTLAKRRTDLKLIVMSATLDALKFQKYF
SLKHGEVAPLFKVPGRTHPVEVFYTQEPEPDYVEAAIRTVLMIHRAEEPGDILLFLTGEE
EIEDACRKIKIEADDLMNQDPDSVGPLVCIPLYSSLPPQQQQRIFDPPPPPRTPDGPPGR
KVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGR
TRPGKCFRLYTERDFMKELEEQTHPEILRSNLANTVLELVKLGIKDLVRFDYVDAPAPET
LMRALELLNFLAALDDDGNLTALGGIMAEFPLDPQLAKMLIVSPEFKCSNEILTIVAMLS
VPNVWVRPPSQRKEADAAKQMLTVPDGDHLTLLNVYNQYVANGQDKNWCWQSYLSARALQ
QADNVRAQLQRNMEKFDIDLVSIQDSNKLYTAIRMALVCGFFMQVAHKEGEKGNYLTVKD
NQVVALHPSCGLDNQPEWVIFHEFVLTTRPYIRTVTEVRPEWLLEFAPQYFDLSTFPDGE
TKRALQRVLNKKQGKAAGRVDGTNSDKRMTKKQKR
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacaatccatacctcgcgcacttgaacccgaagaagggagggaagtccagc
gcttcaccgacaccagggaacaatccactgtacggctttctgccccggagggttacaggg
gagcaagcccgaaaagccctggaatccgatgtcaaccccttcacaatgcaaccccataca
ccccagtacaagaagattttggaggcgcggaagaagctgccggtgtattctcagatggac
gagttctttaagatattttctgaaaaccagatcattgtcatggtgggagagacaggttca
gggaagaccacacaaataccgcagttcgtctgctactccgacctaccacatacgaaagga
aagatggtcgcatgtacgcagcctcggagggtcgctgctatgtcggtagcaaagcgtgtc
gcggatgaaatggacgtccaacttggcaagcaggttggttactccattcgtttcgaggac
atgacagaacccggcaccacattcctcaagtacatgaccgatggtatgctgctgcgagaa
gcaatgaacgacccggagttaacccgatactccactattatcctcgacgaggcccatgaa
cgcacactcgcgacagatattctcatgggtcttctgaagactctcgcgaaacgccgcaca
gatctgaaactcatcgtcatgtctgctaccctcgacgcgttgaagttccaaaagtacttc
tcgctcaaacacggtgaagttgccccgctgttcaaagttcccggtcgcacacaccccgtc
gaagtcttctacacccaagagcccgaaccggattacgtcgaggccgccatccgcaccgtg
ctcatgatccaccgcgccgaggaaccgggagacatcctcctcttcctgaccggtgaagaa
gagattgaagatgcatgcagaaagatcaaaatcgaggctgacgacctgatgaaccaggac
ccagacagcgtcgggccgctggtctgcatccccctctactcttcgctcccgccgcagcaa
cagcagcgcatctttgaccctcccccgcccccgcgcactcctgatggcccgccggggcgc
aaggttgtcatctctaccaacattgcggagacgagtctgacgatagacggcatcgtttac
gtcgtcgaccctgggttctctaagcagaaggtgtacaacccgcggatacgtgtagagagt
ctgctcgtgagcccgatctcgaaggcgagcgctcagcagcgggcgggtcgcgccgggcgg
acgagaccgggcaagtgcttcaggttgtatacagagcgcgatttcatgaaggaactcgag
gagcaaacgcacccggagatcttgcggagtaatctggcgaacactgtgttggagttggtg
aagcttgggatcaaggatttggtcaggttcgactacgtcgatgcgcccgcgccggagaca
ttgatgcgcgcgttggagctgctgaacttcttggctgctctggatgatgatggcaacctc
actgctcttggtgggattatggcggagttcccgcttgatcctcagcttgccaagatgctc
attgtcagcccggagttcaagtgtagtaacgagattttgacaattgttgcaatgctttca
gttcccaacgtctgggtgaggcctcccagtcaaaggaaagaagcagacgctgcgaaacag
atgctaaccgtccctgatggcgaccatctgacattgctcaacgtttacaaccaatatgta
gctaatggtcaggacaaaaactggtgttggcagagttacctctctgctcgtgcgcttcaa
caggcggataatgttcgcgcgcagctgcagcgtaacatggagaagttcgacatcgacctg
gtctccatccaggactcaaacaaactgtacacagccatccgaatggccctcgtctgtggg
ttcttcatgcaggtcgcacataaggagggcgagaagggcaattatttaacggtcaaggac
aaccaggttgtggctttgcatccctcgtgtggtctcgacaatcagccggaatgggtcatc
ttccacgagtttgtactcacgacccgtccgtatattcggactgtcacagaggtccggcca
gaatggctgttggagtttgctccgcaatactttgatcttagcaccttcccggatggagag
accaagcgtgctctgcagagagtgctcaataagaagcagggtaaggctgcaggtagagta
gacggcacgaatagcgacaaacgcatgacgaaaaagcagaaacggtga
DBGET
integrated database retrieval system
