Gloeophyllum trabeum: GLOTRDRAFT_112606
Help
Entry
GLOTRDRAFT_112606 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_112606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_112606
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GLOTRDRAFT_112606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_C
CCDC138_cc
Motif
Other DBs
NCBI-GeneID:
19299574
NCBI-ProteinID:
XP_007870700
JGI:
Glotr1_1_112606
UniProt:
S7REA0
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MSLFGSSTTGGGLFGNTNANTQQQGGQNTTGGGGLFGNLGSSTSTSGAPSLFGNTNTAQQ
PAQGTTNPLFGGASTSGTGGQTQGTGNTGGSGLFGGSGLFGNTNANAANNQQQQSGGGLF
GNTSTNTQPSGGGLFGNTANQNQSQPTTGGGLFGNTNTNTNQQMQGGGLFGNTKPGGGLF
GNTGTSTGNQPSAGGGGLFGNTGTSTQQSGGGLFGNTSTNTQQTGGGLFGNTNTNTNAQQ
SGGGLFGNTNAHTNAPTQGALFGSTLGQSTAGGSNLFGNTGSLFGQTQQAQPQNSLFGGS
TIGQSFLAGGGLLGGSTLGSSVLGGGSLLGTARATVVPSQPADPQSQFLALTQRIEAVMA
AWNPSSPDCRFQHYFYNLVDPNQIHLYGRPPNATNEALWQKAVHENPDPSCLVPALAVGF
DDLQKRVEAQTQQAAAHAEKIKELRSRIENLARKHELSNSSRLHRAAALQAQITHRILKL
VQHLHLLIPALRSSSIRPEEEALRAALEDIDAEIRRPGGIGRLKGKLNELWALIGAVNAA
RERDGKLRADGNVGWAVVDEEGLAQIAQILMEQQAGLEHLTKILQRDLKDLAVIQGASVK
TEDETEEQTDFLLSSASTLRASALR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagtctatttggttcatcaaccactggcggtggcctattcggaaacacgaacgcaaat
acgcagcagcagggaggacagaacacaacaggaggaggagggttatttggaaacttggga
tcgtcgacatcaacatcgggcgctccttcgctgttcgggaataccaacaccgcgcaacaa
cctgctcagggaacgacgaaccccttgttcggtggcgcttctacctcagggactggcggg
cagactcagggcacagggaatacgggaggcagtggtttgtttggtggcagcggtcttttc
gggaacacgaatgccaacgcggcgaacaaccagcagcagcagtccggcggcggcctcttt
gggaacacgtctacgaacacgcagccctcgggcggagggctcttcggcaatactgcgaac
caaaaccaatcgcaaccgactacgggtggggggttgttcgggaatacgaatacgaacacg
aatcagcagatgcaaggtggtgggctctttgggaacacgaagcctggaggaggattattt
gggaatacgggtacgagtactggtaaccagcccagcgcgggtggaggggggttgttcggg
aacacaggtacgagtacgcagcagagcggcggggggctgtttgggaacacgagtacgaat
acccagcagaccggtggcgggctcttcgggaacaccaacaccaacacgaatgctcagcaa
agcgggggcgggctctttggcaacaccaacgcgcacaccaacgcgcccacgcaaggggcc
ctttttggcagcaccttggggcaaagcactgcaggcggctcaaatctttttgggaatact
ggctcgcttttcggccagacgcagcaagcccaacctcagaattcgctattcggcggttct
actataggccagtctttcctggctggcgggggactgcttggcggtagcacgctagggtcg
tcggtgcttggcggcgggagcctcttgggtactgccagagcgactgtcgtaccgtcccag
cctgcagacccccaatcacagttcttggctttgactcagcggatagaggcagtcatggcg
gcgtggaatcctagttccccggattgccgattccagcactacttctacaaccttgtcgat
ccgaaccagatacatctctacgggcggcctcctaatgcgacgaatgaagcattgtggcag
aaggctgtgcacgagaaccccgatcccagctgcttagtgcctgcccttgctgtaggtttc
gacgaccttcagaagcgtgttgaagcccagacccagcaagctgctgctcacgcagaaaag
atcaaggaactgaggtcaagaatagaaaaccttgcccggaagcacgagctgtccaactcc
tcacgcctgcaccgcgcggctgcccttcaggcgcagataacacaccggattctcaagctt
gtgcagcatctacatctcctgatacccgcgctacgttcgtcctctatacggcctgaggaa
gaggcgctgcgagcggcgttggaagatatcgacgctgagattcggagaccagggggcatc
ggtcggctgaagggtaaactgaacgaactgtgggccctgataggtgctgtcaacgcagcg
agggaaagagatgggaagctgcgggctgacgggaacgtgggctgggctgtcgttgatgaa
gagggtttggctcagattgcacagattttgatggagcagcaagctggtttggaacatctc
acgaagattctgcagcgggacctcaaagacctcgctgtgatccagggcgctagcgtgaag
acagaggatgaaacggaggagcaaacggatttcttgctcagttcggcgtctaccttacgc
gcgagtgctctgcggtga
DBGET
integrated database retrieval system
