Gloeophyllum trabeum: GLOTRDRAFT_113217
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Entry
GLOTRDRAFT_113217 CDS
T03130
Name
(RefSeq) vacuolar protein sorting-associated protein 13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_113217
Membrane trafficking [BR:
gtr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
GLOTRDRAFT_113217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
19299692
NCBI-ProteinID:
XP_007861004
JGI:
Glotr1_1_113217
UniProt:
S7QMF8
LinkDB
All DBs
Position
Unknown
AA seq
3122 aa
AA seq
DB search
MWWLDPGKEVLNVVFNRVLAPYIENLDLNQVNYGIGQGQLTLRNLRLKKGALDKFRLPVD
VLEGHLGKFTLSLHWLNLGNQPVEVLIEDVYLLVVPSPQTNVDPKEEEERTQAAKMERLE
NAELLHMRGQADVMPGDSQQSQGLIASLIAKVVNNLQVTVKNIHVRYEDKMSVEGHPFAA
GITLAGFSAVSTNERWEAAFIESTAGAIHKLGKLQSLAVYFDTDCESMAGLPPSEAIQRF
TDLIATEANTSQHQFILRPVTGEGRIVMNHKLDKSTPRFDVQLLFDEIGVVLDDNQYRDA
ISLVEMFHFYSRQKQYRSLRPTPEELSKNRPRALLRFAGTAIFSGIQERNRKWTWAYFAE
RRDDRKRYVELFKQKSLGPLVGNDLKMFESLERKLSYEDIRFYRSIARSQLKKDYVARRK
IEEERKQKQANQSRSSWSSWIWGSSGSDGSNAQEPSFSGEMTEEQRKELYDVLDYDEKTA
LAESFEAPRDALKARIKAQLRRGSFALKADPHGKAVEIVSVVFDAFQADVIQRPDNLEMS
VSLGGFRVFDGTTPNTLYHQIVHVKDNISEDPEITTQENHEPFFFLKFENNPLDERADTA
LTVRMRHMEIIYHRGYVEAVYRFFKPPKSQLESVEALLDAASQTLEGLRKETRAGLEYAL
QTHKTVDVHMDLNAPIIIIPEDITTNECKHLIVDAGHIAIESDLADKAAIREVHLKRNQQ
YTDADQKRLESLMYDKLLLRLEAAQFVIGNNLQSCRDALAEGTHDDLHVVERINLDFQVQ
NSIVPSAYSLARFKVSGTLPSLQVNVSDVKYKSLMRLIDVAIPHFDDIDAQSPETTETVK
HTSMTFPLSSGLFGPTEAEYHLDSDDEEAGEETPAGEQEEFFEVEEGTSLMPELRQHIFE
FNFAVAEFCVSLSKWSADEGEKPLGKLNLEGFTLAFAMAKYNMGADVNLKALSMDITQPG
RDPVKFVTSSTGESSSSEHLLTVKYSRADKASPEFDTTFQGVDQSVDIKISTFIFRAAPE
PVVLLYDFIMSTFVPQPRSDGPANTLQVDDEGKNVDTSPSKNIGNPSEKIRVVVKLDSIE
VILINDEVQLATLSLSTADVSVLLRAGTIRVSGRLGNLSLSDDSALGTAVPEFKQIMSIE
GDNFAVFSYQTYDPMDEDSYVGIKSSVSVEAASVHLHFLEQPLHDIYLFVVKLAKLKGLY
DAATQAAIQSASEIDRMHYRISIKSPILVFPCNVVESKDVLTMRLGEVQASNAYEGDTNN
VDASLHGIQLASTFYYQQTASILKIIDDINVNARTVQAIGIDRESEADRPDTQIAVTTSD
IKLHLTQVQYRSLLSLLTSIPKVLAGAPEGSAQAAESSVYSSSRQASSSTAGDGFGEDLR
PELQPLPSPNGTRPWTSLDFVLEVNSIKLHLYDESATSTASLKEHGIARFALNNNTARFK
LLSDGASEAQIILQSLTMSNTQPGSSKFREIIPAAQHDRNQVMILYTTAGGSQKSSLAVA
TIDSPQFLLAIDLVFALLDFFTSGLPSMNAEGQDNAQESPAGDSYGATVDFRIDLHDLSV
IVLENDALTNTQAIQLSIKQVLVSQQGILAVTVERLGMSLIQMGKDSERVSFLDDVDSTL
SVDSRSSSSARQMTNIEMTSKPIIFRASYRDISLIMTIVNKALNLYNKSSQSDGTGQRPL
TSPGELSETRKTRRSSSFAVPKSSHPATGTVGEAEALITKEQFTGSFDGFRLVLIGDIYE
QPMLHLKVKRFIIGARDWSGELQATTTVSTQVNYWNLSNSHWEPLIDPWTVSASIARDRV
SNGLSVRLGAQDRLDMNVSTTFMELVMTTARLWGKEGEHVLQNARGSYAPYRIRNRTGST
VYVWSDTENSYGSETSALTRSLADGQVIDWRFDDWRTMREHSSIGHHNIGVQFVGKPWEK
LRSIPVDREGEFTFSLRTQTDKHFNRLLCEVRVQDDNVKVVTLRSTYKVENQTLYPVELT
MVDESGRPAYSLEKIAPGQDFSLPIEAVGRARIRLQPDQGFGYKWSSAIPWEDLISRKNF
TIRCPHAEESEAPFRFQASVQTDLAEHVSRKHPKIHLKLRAPIELENLLPYNVQYRVYDK
DSDQNWRSYLRQGGVMPVHSVELAHLVLLNVHVEDTVFQPSDFAIINSDGNSDLDVDSKL
SMRDTKGRKLDLRLNYVRYPESGGAFKVQIYSPYLVINKTGLPFFIKCIRSARPSSPQDV
AGDTRPETLSSQVPFMLSHPQDKRHEFTFQLGGSVWSKAVSLEAPAAETRLVLQSQSQKG
KELHVGLSWTEGSGKYKLTKVITLSPRFLVKNCLLEPLIFREHGVPPHDRSMLQPGERAS
LDWTRVDQEKLLTVALPGLDAVWSPPINIEDIGSVHLRLRVPGESSTIRLVRADVKMGGA
TIFVSYSPAQDGWPFVVENDSDFDFTIAQVDAASMGVPPQARNRPSYTVQRHSSLEYAWD
YPAAREKKIQLRINDSSRVVDIMEIGDLMPFRFPMSPGTRTVSLDVRADGPKQILRITNY
NPVFSLYKPKHRQSASISRSDTTSSQDAFEAVTEQVAPALSINLDFAGLGLSLINRRLVE
VVYLSAKALKFEYSSSDVAQSLNLTCGTLQVDNQLHDAIFPVVLQPSPVAKEANGGAALP
TIQASVIWLNDQEHGVMFIKYCSILLQALTLEADEDFVFELYELSQFRGASWEEAQDDTL
IRNPDGIPEPEEVAAGQDLYFEVLELQPIRLSISFMRTERVSSDERLSSRNPLAVLVNAL
TMTLGNINDAPLELNALAIKDMRLTPNELQNRIIYHYRQDTLRQLYRIIGSADFIGNPVG
LFTNVSSGVADIFYEPWNGVVMHGNKELGIGIAKGAASFVKKTVFGLSDSMTKFTSSVGK
GLSAATFDTEYQNRRRMTQRRNKPRHAIYGVTAGAEAFANSVASGVEGVVMKPIEGAESG
GAVGFFKGVGKGLVGAVTKPVIGVFDLASNVSEGIRNTTTVFDNPERDRVRLPRHIPADG
VLVPYCAQAALGQYWMKDLDDGRFRRENYVAHINLPGGDNVVLLTAERVLSFWSRKLRLE
WELPFTHVRGVTIEDTGIRFAHKAGKEHDKFVFIPDKASQTWFFSQVAAVVKSFNVRRRM
DA
NT seq
9369 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggttagatccagggaaggaggtgttgaacgtcgtgttcaatcgagtcctcgcg
ccatacattgagaatctcgatcttaaccaagtgaactatgggatcggccaaggccagttg
acactgcgcaacctacgcttgaagaaaggagcgttagacaagtttagattgcccgtagac
gtcctagaaggccatttggggaagttcacgctgtccttacattggctgaacctgggcaat
cagccagttgaagtattgatcgaggatgtctaccttctagtcgtcccttccccgcagacg
aatgttgacccgaaggaggaggaggaacgaacccaagcggctaaaatggaacgtttggag
aatgcagagttgcttcatatgcgcggtcaggcagacgtaatgccaggggactcgcaacaa
tcgcagggtctaatcgcgtccctcatcgcgaaggtggtgaacaacctgcaggtcacagtg
aagaacattcatgtccggtacgaggataaaatgagtgtagagggccatccgtttgctgct
ggcattacactcgccggattttctgccgtgtctaccaatgagcggtgggaagcggccttt
attgaaagtaccgcgggtgccatacacaagcttggaaagctccaatcgttggcagtatac
ttcgatacggactgtgaaagcatggctggactaccgccgtcggaagccatccagcgtttc
acagatcttatcgccacagaggcgaatacttcccaacaccagttcatattgagacccgta
accggagagggtagaattgtcatgaaccataagcttgacaagtccactcctcgtttcgac
gtgcagctacttttcgatgaaatcggggtcgttctcgatgataaccagtaccgtgacgcg
atttcactcgtcgaaatgttccacttctactcgcggcagaaacaataccgaagcctgcga
ccgactcccgaggagttgagtaagaaccgacccagggctttgcttcggtttgctgggaca
gcaatattctcgggcatccaagagcgtaaccgcaaatggacctgggcttattttgcggaa
cgacgtgacgatcgtaaaagatacgtggagttgttcaagcagaagtcgctcgggccccta
gtgggcaatgacttgaaaatgtttgagagtctcgaacgcaagctttcctacgaagatatc
cgattctaccgttctatagctcgtagccaattaaagaaagactatgttgcccgcaggaag
attgaagaggaacgcaagcagaagcaagcgaatcaatcccgctcaagttggagttcttgg
atatggggctcttctggttcggatggatccaatgcgcaggaaccttcgttctcgggcgaa
atgaccgaagagcagcggaaggaactctacgatgtcttggattatgacgagaagaccgct
cttgccgagtccttcgaagcaccccgagacgctttgaaagcccgcatcaaagcgcaactg
cgacgaggttctttcgcacttaaggcggatcctcacggaaaagctgtagaaatcgtatca
gttgtattcgatgctttccaagcggacgtcatccaacgccctgataatctggaaatgtcc
gtctcgttggggggcttcagagtgtttgatggcaccacgccaaataccctctatcatcag
atcgtccacgtcaaggataacatcagcgaagatcccgaaataacaacacaagaaaatcac
gagccgttcttcttcctgaagttcgagaacaatcctctcgacgagcgtgctgataccgca
cttacagtccggatgcgccacatggagattatataccacagaggctacgtcgaagctgtc
tatagattcttcaagcctccgaagagccaattggagtctgttgaggccctcctagatgcc
gccagtcagaccctcgagggtttgcgaaaggaaactagggcaggcttggaatacgccttg
cagactcataagactgttgatgtgcatatggacctcaacgctcccatcatcattattcct
gaagacatcacaacgaacgaatgcaaacatctgatcgtggacgctggccatatagctatt
gagagcgatcttgcggataaggcggccatacgagaggtacatctcaagcgaaatcagcaa
tacacagatgcggaccagaaacggctggagtctctgatgtacgacaagttgttactgaga
ttggaagctgctcagtttgtgatcggcaataacctgcaatcctgtcgagatgctcttgcc
gaggggacacacgacgatctccatgtagtggagcgcatcaacctcgattttcaagtgcaa
aactctatagtcccaagtgcatacagccttgcgcgattcaaagtgtccgggactttacct
tcgttacaggttaacgtgtcggatgtgaagtacaaatcccttatgcgtttgattgacgtc
gccattccccatttcgatgacatcgatgctcagagtcccgaaacaaccgaaactgtcaag
catacatccatgacgttccccctgtcctccggtttgtttgggcccacggaggctgaatat
catctcgatagcgacgatgaggaagcaggagaggagacacctgctggtgaacaagaagag
ttcttcgaggttgaggaaggaacgtcgctgatgccggagctgcggcagcacatctttgag
ttcaatttcgcagtagcagagttctgcgtgtcactctccaaatggagcgcagacgaaggc
gaaaaacctttgggcaagctaaatcttgaaggtttcacgctcgcctttgcaatggccaag
tataatatgggggcggacgtgaacttaaaggctctgtccatggacatcacacaaccaggc
agagatcctgtgaaattcgtgacctcgtccactggcgaatcttcaagcagtgaacatctg
ctgacagtgaagtatagtcgtgccgataaggcctcgccggagttcgacacgactttccag
ggcgtagatcaaagcgtagatatcaagatatcgacgttcatcttccgcgctgctccggaa
cccgttgtcttgttgtatgacttcatcatgtccacttttgtaccgcagccacgatcggat
gggccggccaacacgctgcaggtcgatgacgagggcaagaatgttgacacctcaccttcc
aaaaacatcggaaatccctctgagaagattcgagtcgttgtgaagctggacagtattgaa
gtgatcctaataaacgatgaggtgcagctagccacgttatcgttgtcaacggccgatgtt
tccgttctcctgcgcgctggcacgattcgtgtgagcgggagactgggcaatctttccctc
agtgatgactccgccttagggaccgcagtgccagagttcaagcaaatcatgtctattgaa
ggtgacaacttcgcggttttcagctaccaaacctacgaccccatggatgaggactcatat
gtcggcatcaagtcgtcagtttcagttgaagcagcgtctgtccatcttcacttcctcgag
cagcctctgcatgatatatatcttttcgttgtcaagttggccaaactcaaggggctgtac
gatgctgcaactcaggccgctatacagagtgcgtcagaaatcgacaggatgcattatcgt
atttccatcaagtcgcctattttggtcttcccttgcaacgtggtagagtccaaggatgtg
cttacgatgcgattgggcgaagtccaggctagcaacgcgtacgagggtgacaccaataat
gtcgatgcaagcctgcacggaatccagttggcatctactttttactaccaacagaccgcg
tcgatattgaaaatcatcgatgacatcaacgtgaatgctagaactgtccaggcgattggc
atcgacagagagtcggaggctgaccgaccagatacgcagattgctgtaaccacctctgat
attaaactgcacctaacacaagtacaatatcggtctctcttgtcattgttgacatccatc
cccaaggtcttggcgggcgctccggagggatctgcccaggctgccgaatcgagcgtgtat
agtagctcaagacaggcaagttcgtcgactgccggtgacggtttcggcgaagacctccgt
cccgaactacagcctcttccttcccctaacggtacaagaccttggacctctctcgatttc
gtgttggaagtgaacagtatcaagttgcacctctacgatgagagtgccacctcgacagca
agcctcaaagagcatggcatcgctcgttttgcactgaataacaacaccgctcgattcaaa
ctgctctcggacggcgccagcgaagcccagatcattctacaatcgctcaccatgagtaac
actcaaccaggaagctccaagttccgggaaatcatacccgctgcgcagcacgatcgcaat
caggtcatgatactatatacaaccgcaggtggctcacagaagtcgtctttggctgttgct
acaatcgactctccccagtttcttcttgccatcgatctggtgtttgcattgcttgatttc
ttcacgagcggcctcccatccatgaacgcagagggtcaagataatgcacaggaatctcca
gcaggagactcctatggagccactgtcgactttcgtattgatcttcatgatctctccgta
attgtactcgaaaatgacgcattgacgaatactcaggccattcagttgtcgataaagcag
gttctcgtgtctcaacagggcatactcgccgtgactgtagagcgcttgggcatgtctctc
atccagatgggaaaagactcggaaagagttagtttcttggatgacgtggattccactctt
tcagtcgacagtcgtagctcatcctcggcgaggcaaatgactaacattgagatgacatca
aagcccatcattttccgggcttcctaccgagacatcagcctgataatgacgatcgtcaac
aaggccctgaatttgtacaacaagtcctctcaatctgacggcacaggacaacgaccgctt
accagccccggtgaactctctgagacgaggaaaacccgtagatcgagctctttcgctgta
ccgaagtcaagccaccccgcaacgggcacagttggggaggctgaagctctgattacgaag
gaacagttcactggttctttcgatgggtttcgtttggtactcatcggggatatttacgag
caacccatgctacacttgaaagtgaagcgtttcattatcggtgcaagggactggtccgga
gagctccaagccactacaactgtttctacgcaggttaactattggaacctgagtaactcg
cactgggagcctttgatcgatccttggaccgtcagtgcatcaattgctagagatcgggtg
tcaaacggtttgtccgtcaggttaggagcccaagaccgtctggatatgaacgtcagtacc
actttcatggagctggtcatgactacggcgaggttgtggggaaaggaaggagagcatgta
ttgcagaacgctcgtgggagctacgctccttaccgcatacggaaccgtacaggatctacc
gtttatgtctggtccgatacagagaatagttacggcagcgagacatccgccctgaccagg
agcctagctgacggccaggtgatcgattggagatttgacgactggaggacgatgcgagag
cattcctccataggtcatcataacatcggtgtccagtttgtcgggaagccatgggagaag
cttcgcagtatcccggtggatagggaaggagagttcactttctcgctccggacccaaacc
gacaaacacttcaaccgtctcttgtgtgaagtccgcgttcaagacgacaatgtcaaggtg
gtgacccttcgttcaacgtacaaagtggagaatcagactctttatcctgtcgagctaact
atggtagacgaatctgggcgaccggcctattcgctggagaagattgccccggggcaagac
ttttccttgcctattgaagctgtaggtcgcgcgagaatcagacttcagccggaccaaggc
tttggttacaagtggtcctctgctatcccatgggaagacttgatctctagaaaaaacttc
accattcgatgcccccacgcggaggaaagtgaggcaccctttcgcttccaagcgtcggtc
cagacagacctcgcggaacatgttagtcgaaaacatcctaagatccacctcaagctacga
gcgccaatcgagctggagaatctactgccttacaacgtgcagtatcgggtatacgataaa
gattccgaccagaactggaggagttacttaagacagggaggtgtcatgccagtgcactcc
gtagagctggcccatcttgtgcttctcaatgtgcacgtcgaagataccgtgtttcaacca
agcgactttgctatcattaacagtgatggtaattccgaccttgatgtggatagcaaattg
agcatgcgtgacaccaaaggacggaagttggatttacgactgaattatgtccgttaccca
gagtcaggtggagcgttcaaagttcaaatttacagcccatatctcgtcatcaataagacc
ggcttgccgttcttcatcaagtgtatacgctctgctagaccaagctctccacaagatgtc
gctggagataccaggccagagaccctctctagccaagttccattcatgctttcgcatcct
caggacaagaggcacgaattcacgttccaacttgggggctctgtatggtctaaggccgtg
agcctagaggcacccgcggcggagacgagactcgtgctgcaatctcagtctcagaaggga
aaagaactccacgtgggattatcctggacagaaggcagtggcaagtacaagctcaccaaa
gtcattacgctatctccgcgttttcttgttaagaactgtctcctcgaacctctaattttc
cgtgaacatggagtcccacctcatgaccggtccatgctgcaacctggagaacgagcatca
ctagactggaccagggtggatcaggaaaaactgttgacggtggcacttccgggactagac
gctgtttggtcaccgcccatcaacatcgaagacattgggtctgtgcacctgcgactccgt
gtaccgggtgaatcaagtactatacgccttgttagagcggacgtcaaaatgggaggtgcc
accatatttgtatcgtactcgccggctcaagatgggtggccatttgtcgtggaaaacgac
agcgattttgatttcacaatcgctcaagtggatgccgcatccatgggagttccaccgcag
gcaaggaataggccatcctacacagtgcagagacattcctcgttagaatacgcctgggat
taccctgccgcgcgggagaagaaaattcaactcagaatcaatgattcttcccgagtagtg
gacatcatggagatcggcgatctcatgcctttcaggttcccgatgtccccaggtacccgt
acagtctcgctggacgttagggcggatgggccgaagcagattctacgcataacgaactac
aatcccgtcttcagcttgtataagccaaagcaccgccagtctgcttctatctcgcgttcc
gatactacgagtagccaggacgccttcgaagccgtgacagaacaagtcgcacccgcactg
agtatcaatctcgattttgctggccttggcctctctctcatcaaccggagacttgtggag
gtcgtctacttgtcagcgaaggctttgaagttcgaatattcctccagcgacgtggcacag
tcgttgaatctcacttgtggcacgttgcaagtcgacaatcagttgcatgacgcaatattt
cctgttgtcctgcagcccagtccggtagctaaagaagccaatggtggtgcggcattaccg
acaattcaggcctctgttatctggttgaacgatcaagaacatggcgtgatgtttatcaag
tactgctcgatattgctgcaagcgttgacgttagaggccgacgaggacttcgtgtttgag
ttgtatgagctgtcccaatttaggggagcctcatgggaggaagcgcaggatgacaccctc
attcgtaacccggatggtatacccgaacctgaggaggtagctgctggtcaagatctttac
ttcgaggttttggagcttcagcccatcagactctcaatatcatttatgcgtaccgaacgc
gtcagtagtgatgagagacttagctcgaggaatcccttggcagtgcttgtgaatgcgctc
actatgaccctcggtaatatcaacgacgccccattggaattgaacgcactcgctatcaag
gacatgcgattaactcccaacgagcttcagaatagaatcatctaccactatcggcaggac
acgcttcgacagttgtatcgcatcattggatccgctgatttcattgggaatcctgttgga
cttttcaccaacgtcagttcaggtgtcgcggatatcttctacgaaccgtggaatggcgtt
gtcatgcatgggaacaaggagttgggtattggcatagctaagggggctgccagctttgtt
aagaaaacggtattcggtttgtcagacagcatgaccaaatttaccagtagtgttggcaaa
ggtctttctgctgcaactttcgacactgagtaccaaaacaggcgcaggatgacccagagg
cgaaataaacctcgtcatgccatatacggcgtgacagccggagcagaagcgttcgcgaac
agcgtagccagtggcgttgagggagtagtaatgaagccgatcgaaggggcggagtcgggc
ggcgcggtaggtttcttcaaaggcgttgggaagggactagtgggggccgtaaccaagcca
gtaattggcgtcttcgacctggcatccaatgtatctgaaggcatcaggaacaccaccact
gtcttcgacaatcctgaacgagacagggtccgactccctcggcatatcccagcggatggt
gtattggttccgtattgcgcgcaagcagctttggggcaatattggatgaaagacctggat
gacggtagattccgacgggaaaattacgtcgcacacatcaatctaccaggaggggacaac
gtagtgctgctcacagcggaacgggtattgtctttctggtctcgaaagttgcgattggaa
tgggaacttccgttcacgcacgtacggggtgtcaccatcgaggacactggtatccgtttt
gctcacaaggccgggaaagagcacgacaagtttgtgttcattccagataaggcttcgcag
acgtggtttttcagtcaggtggcggctgtcgtgaagtcatttaacgtgcggagacgtatg
gatgcttga
DBGET
integrated database retrieval system
