Gloeophyllum trabeum: GLOTRDRAFT_113282
Help
Entry
GLOTRDRAFT_113282 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GLOTRDRAFT_113282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_113282
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_113282
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
GLOTRDRAFT_113282
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
GLOTRDRAFT_113282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-CCHC_2
F-box_5
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
19299703
NCBI-ProteinID:
XP_007861064
JGI:
Glotr1_1_113282
UniProt:
S7QMN8
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MALVGPAHLKDLVQPQFHQNNFQEELYIKNELGLKLDKDDQICRLSLTPAGCPLGPLHCP
LRHTTPSPLNFQPPKQLPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECW
WFAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPTCPRKHVRRVACQNYLTGFCPL
GPECPRGHPKPGLPPPEAYEPPPPPSSRELGPPPPGYGRYADFDRGFPGAMGPSVGNAPP
MPRRNLDDVLCFKCGEKGHYANHCRNRNVPGNRGGVERSKRYGQED
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtcggacccgcgcatctgaaggaccttgttcaaccgcagtttcaccagaac
aattttcaggaggagctctacatcaagaacgagctaggtctcaagcttgataaagacgat
cagatatgccgtctctcgctcactcccgctggttgtccacttggacccttacattgtccg
ctacgccataccacgccctcgcctctgaatttccaaccgcccaaacaacttcctacgcat
ccccgggatcgcgagcggttagcgaccgtgtgtaagcattggctgcgtggactatgcaag
aagggagatgcctgtgagttcttgcacgagtacaaccttaggcgtatgccagaatgctgg
tggttcgccaagtatggttactgttctgctggagatgagtgcctgtatgcgcatccgaaa
gagcgccgcgtcgagtgtccggattacaagcgaggtttctgcaagctcggacccacatgt
cctcgaaaacatgtacgccgcgttgcctgtcaaaattacttgacgggcttctgtcctctg
ggtcctgagtgcccccgcggccacccgaaacctggactgccaccaccagaggcttacgaa
cctccccctccgccctcttcacgtgaactaggccctccacctcccgggtatggtcggtat
gcagattttgatcgtggcttccctggtgctatgggtcccagtgtcgggaacgcgcctccg
atgcctcgtcggaatctcgacgatgtactatgtttcaagtgtggcgagaaaggacattat
gccaaccactgccgcaatcggaacgtgcccggcaaccggggaggcgtggagcggagcaaa
cgatacggtcaggaggactag
DBGET
integrated database retrieval system
