Gloeophyllum trabeum: GLOTRDRAFT_113879
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Entry
GLOTRDRAFT_113879 CDS
T03130
Name
(RefSeq) zf-U1-domain-containing protein
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_113879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_113879
Spliceosome [BR:
gtr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
GLOTRDRAFT_113879
Complex B
GLOTRDRAFT_113879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
19299801
NCBI-ProteinID:
XP_007862153
JGI:
Glotr1_1_113879
UniProt:
S7S050
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITAAYESS
GGPPPGGFGFGPQHLGPPAPFAGPPGFGGPPPGFGGPPPGFGGPRPPFPPGPGFPPMGAP
GAPPFPPSMPPPGMAGPPGAGPPPFAPNAQGLSGGPPPFPPNFQSPPPGQGPPGGNFGNA
PFNGPGQSQGPPSASSGPPGPGGIHPDRLRMMNGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacactactgcgattactgtgatgtcttcttgactcacgactcggcttcggtg
cgtaaagcccataatagcgggcgtaatcaccttgcaaatgttcgggactactatgcctcc
ctcggtcacgacaaggcgcagagtataattgaccagatcacagccgcctatgaatcgagc
ggtggacctccgcctggtgggtttgggtttgggccgcagcacttggggccacctgcgccg
ttcgctggcccccctggcttcggcggcccccctccaggtttcggggggcctccccccggt
ttcggtggaccccggcctcccttccctcccgggcctggtttcccgcctatgggtgcacct
ggtgcacctccattccctccaagtatgcctcccccaggaatggccggccctcccggcgca
ggaccacctccgttcgcaccgaatgctcaaggtctttcaggcggtcctcctcccttccct
cccaattttcaatcgccccctcctggccaaggacctccgggtgggaacttcggtaacgcc
ccatttaatggaccaggtcagtcacagggcccaccttccgcttcgagtggacctcctggc
ccgggcggtatacatcctgaccgtctcagaatgatgaacgggaggtga
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