Gloeophyllum trabeum: GLOTRDRAFT_114034
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Entry
GLOTRDRAFT_114034 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_114034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_114034
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GLOTRDRAFT_114034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Utp12
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
DSE1_N
Beta-prop_WDR75_1st
ASA1
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_NOL10_N
PEP5_VPS11_N
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IP5PC_F
WDR54
RMC1_N
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_EIPR1
VPS11_N
Beta-prop_LRRK2
Ge1_WD40
WD_LRWD1
AP3D1
ELYS-bb
Utp21
Motif
Other DBs
NCBI-GeneID:
19299824
NCBI-ProteinID:
XP_007862334
JGI:
Glotr1_1_114034
UniProt:
S7QIY6
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MVQSYLRHGPTQAFGLVCSPSSNSVYDDRIAYVPALEDVLVWDVKKGQMLAMWHETGHRA
EVTCIQRSPRKDTFAVGYADGSIRLWSASTGTVTTTLNGHKKMVTALAFDDAGTRLASGS
QDTDLIIWDIIAEAGLFRLRGHRDQITAIRFINAPSAVQPSTSTASSPGYILTGSKDTFL
KLWDLSTQHCIQTLVSHRAEVWSMDLDKEQKVVFTGSGEGELRAWRLDQEALAEGLKETE
TGQLTKMIQPITTLPLSSSHRVSQISFHPTLPYLAVQSHDRSVELFRIRTEEEVRKKQAR
RRKRAKEKKEKHSGKGKDKNGEEGDADMDENKGIELVDLFTPYLVVRASGKIRSFDFPTS
ESSLKGNTQLFVALSSNALEVYNIPPPTKSKEETSEATRMYSLDLPGHRTDVRTLSLSSD
DMLLASASNGSVKIWNMKTTACIRTLDCGYAICSTFLPGDRQVAVGTKSGDIFIYDLASS
SLVETIQAHTATVWSMQVRSDGMALVTGSADKDVKFWEFEEKESTGVDAQGPKLVTLVHV
RTLKMTDDVLSVRYSPNRKLVAVSLLDSTVKVFYEDSLKFFLSLYGHKLPVLSMDISDDS
KLIVTCSADKNVKIWGLDFGDCHKSIFAHDESVMQVAFEKKSHYFWSVGKDKMLKYWDGD
KFENIQKLEGHHGEIWTLAVSHFGNFVVTGSHDKSIRVWEKLDEPLFLEEERERELEGLY
ESGIAESMNREDGPIGSGAADGGEAPTQAEATAVLKQTTETLMAGERIIEALDLADAERA
AFREYEEAKASLSPEEAEKLPPPARNAVLAAYDVTPEAWVLRVVDKIPNTALQDALLVLP
FGKVVSLMNYLNMWAQKEWNIILVSRIMFFLLKTHHHQIVANRIMRTTLMSLRKHLRFVL
QRQKQTIGYNLAALQFIQRRNDTERTAQFYEEEGMDEEKVRAKIAEGKKRKRVSIKA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggtacagagctatctgaggcatgggccaactcaggcctttggacttgtatgcagtcct
tcgtctaactcggtatacgatgatcgaatagcctatgttcccgcattggaagacgtactg
gtatgggacgtcaagaaaggtcagatgctcgctatgtggcacgagacggggcatagagcc
gaggtaacctgcatccagcgttccccgcgcaaggatacctttgcagtaggctacgcagac
gggtctattcgattgtggagtgcctctacaggcacggtgactaccacattgaatggccac
aagaaaatggtcaccgctctggcatttgacgatgctggtacacgccttgcgtcgggttcg
caggacacggaccttatcatatgggatatcattgcggaagcgggtctgttccgcctgaga
ggtcacagggaccagataactgcgatccgattcataaacgccccatccgccgtccagccc
tctacctcaacagcctccagtcccgggtacatcttgactggctcgaaagatactttcctg
aagctatgggacctctccacacagcactgcatacagactctggtcagtcaccgcgcggaa
gtatggtcgatggacctggacaaggagcagaaggtagttttcactggtagcggagagggc
gaactgagggcgtggcgcctcgatcaggaagcgcttgctgaaggtctgaaagagaccgaa
actgggcagctcacgaaaatgatacagccaatcaccaccctccctctctcgtcctcccat
agggtttcccaaatatcgttccacccgactctcccgtatctcgccgtacagtcccacgat
cggtctgtcgagctcttccgtatccggactgaagaagaagtgaggaaaaagcaggcgagg
cgtagaaagcgcgccaaggagaagaaagagaaacactctggtaagggtaaggacaagaat
ggggaagagggcgacgcggatatggacgagaacaaggggatcgaactcgtagacctgttc
acaccataccttgtcgtccgggccagcgggaagattaggtcgttcgacttcccgacttcg
gagtccagtctaaaggggaacactcagcttttcgttgccctgtcttccaatgcacttgag
gtgtacaatattcctccaccgacgaagtccaaagaggagacctcagaggctactcgcatg
tactctctcgatttgccggggcaccgcacggacgtcaggacgttgtcattgagctcggac
gacatgctccttgcatcggcctcgaatggctccgtgaaaatctggaatatgaagacgact
gcctgcatcaggacactagactgcggatacgcaatctgcagcaccttcttacccggtgat
aggcaggttgccgtcggtacgaaatccggcgatatcttcatctacgacctggcatcctcg
tcgttggtagagactattcaggcgcatacagcgaccgtctggtctatgcaggtccgctcc
gatggcatggcccttgtcactggtagtgcggacaaggatgtcaagttctgggagttcgaa
gaaaaggagagtactggtgttgatgcgcaggggcccaaattggtcacattggttcacgtc
cgtacactgaagatgacggacgatgtgctctccgtccggtacagcccgaacagaaagctc
gtggctgtctcgctgctggattcaactgtaaaagtattttatgaagacagcttgaagttc
ttcctctccctttacgggcacaaactgcctgtgctgtcgatggatatctcagatgactcg
aaattgatcgtgacatgctctgcggataagaatgtcaagatatggggtctcgattttggt
gactgccacaaatcaatatttgcgcatgacgagagcgtcatgcaggtggcgtttgagaag
aagtcgcattacttttggtcagtcggcaaggacaaaatgctgaagtactgggacggtgac
aagtttgagaacatccagaagttggaaggtcaccatggggagatatggacactggctgtg
agccacttcggtaattttgtggtcactgggtcacacgataagtctatccgagtctgggag
aagttggacgagccgctattccttgaagaagaacgagagcgagaactcgagggcctttat
gaaagcggaattgctgagtccatgaaccgtgaggatggacccataggtagtggagctgca
gacggcggtgaggcaccgacacaggcagaagctaccgcggtcttgaagcagactacggag
accctgatggctggcgagcgcatcattgaggcgcttgatctcgcagacgcagagcgggcg
gcgttcagggaatacgaagaagcgaaggcgtccttgagcccagaggaggcggagaagtta
ccgccccccgctaggaacgctgtgctcgcagcgtatgatgtgaccccagaagcgtgggtt
ttgcgcgtagtcgataaaattcccaatacagcgcttcaggacgcgctattggtcttgccc
ttcgggaaagtggtgtccttgatgaactatctcaacatgtgggcccagaaggagtggaac
atcattctcgtctcgcggatcatgttcttcctcctaaagacgcatcaccaccaaattgtc
gcaaaccggatcatgcgcaccacccttatgtcgctccgcaagcatctacggttcgtgctg
cagcggcagaaacagacgataggttataatctagccgcacttcaattcattcagcgtcgg
aacgacaccgaaaggacggcgcagttctatgaggaagaaggcatggacgaggagaaagtg
cgagcgaagattgccgaagggaagaagaggaaacgagtgagcatcaaagcttga
DBGET
integrated database retrieval system