KEGG   Gloeophyllum trabeum: GLOTRDRAFT_114034
Entry
GLOTRDRAFT_114034 CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GLOTRDRAFT_114034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gtr03009]
    GLOTRDRAFT_114034
Ribosome biogenesis [BR:gtr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    GLOTRDRAFT_114034
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Utp12 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR75_1st ASA1 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_NOL10_N PEP5_VPS11_N NBCH_WD40 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR19_1st CFAP251_N Beta-prop_RIG_2nd Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IP5PC_F WDR54 RMC1_N Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_RIG_1st Beta-prop_Nup120_160 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_EIPR1 VPS11_N Beta-prop_LRRK2 Ge1_WD40 WD_LRWD1 AP3D1 ELYS-bb Utp21
Other DBs
NCBI-GeneID: 19299824
NCBI-ProteinID: XP_007862334
JGI: Glotr1_1_114034
UniProt: S7QIY6
LinkDB
Position
Unknown
AA seq 957 aa
MVQSYLRHGPTQAFGLVCSPSSNSVYDDRIAYVPALEDVLVWDVKKGQMLAMWHETGHRA
EVTCIQRSPRKDTFAVGYADGSIRLWSASTGTVTTTLNGHKKMVTALAFDDAGTRLASGS
QDTDLIIWDIIAEAGLFRLRGHRDQITAIRFINAPSAVQPSTSTASSPGYILTGSKDTFL
KLWDLSTQHCIQTLVSHRAEVWSMDLDKEQKVVFTGSGEGELRAWRLDQEALAEGLKETE
TGQLTKMIQPITTLPLSSSHRVSQISFHPTLPYLAVQSHDRSVELFRIRTEEEVRKKQAR
RRKRAKEKKEKHSGKGKDKNGEEGDADMDENKGIELVDLFTPYLVVRASGKIRSFDFPTS
ESSLKGNTQLFVALSSNALEVYNIPPPTKSKEETSEATRMYSLDLPGHRTDVRTLSLSSD
DMLLASASNGSVKIWNMKTTACIRTLDCGYAICSTFLPGDRQVAVGTKSGDIFIYDLASS
SLVETIQAHTATVWSMQVRSDGMALVTGSADKDVKFWEFEEKESTGVDAQGPKLVTLVHV
RTLKMTDDVLSVRYSPNRKLVAVSLLDSTVKVFYEDSLKFFLSLYGHKLPVLSMDISDDS
KLIVTCSADKNVKIWGLDFGDCHKSIFAHDESVMQVAFEKKSHYFWSVGKDKMLKYWDGD
KFENIQKLEGHHGEIWTLAVSHFGNFVVTGSHDKSIRVWEKLDEPLFLEEERERELEGLY
ESGIAESMNREDGPIGSGAADGGEAPTQAEATAVLKQTTETLMAGERIIEALDLADAERA
AFREYEEAKASLSPEEAEKLPPPARNAVLAAYDVTPEAWVLRVVDKIPNTALQDALLVLP
FGKVVSLMNYLNMWAQKEWNIILVSRIMFFLLKTHHHQIVANRIMRTTLMSLRKHLRFVL
QRQKQTIGYNLAALQFIQRRNDTERTAQFYEEEGMDEEKVRAKIAEGKKRKRVSIKA
NT seq 2874 nt   +upstreamnt  +downstreamnt
atggtacagagctatctgaggcatgggccaactcaggcctttggacttgtatgcagtcct
tcgtctaactcggtatacgatgatcgaatagcctatgttcccgcattggaagacgtactg
gtatgggacgtcaagaaaggtcagatgctcgctatgtggcacgagacggggcatagagcc
gaggtaacctgcatccagcgttccccgcgcaaggatacctttgcagtaggctacgcagac
gggtctattcgattgtggagtgcctctacaggcacggtgactaccacattgaatggccac
aagaaaatggtcaccgctctggcatttgacgatgctggtacacgccttgcgtcgggttcg
caggacacggaccttatcatatgggatatcattgcggaagcgggtctgttccgcctgaga
ggtcacagggaccagataactgcgatccgattcataaacgccccatccgccgtccagccc
tctacctcaacagcctccagtcccgggtacatcttgactggctcgaaagatactttcctg
aagctatgggacctctccacacagcactgcatacagactctggtcagtcaccgcgcggaa
gtatggtcgatggacctggacaaggagcagaaggtagttttcactggtagcggagagggc
gaactgagggcgtggcgcctcgatcaggaagcgcttgctgaaggtctgaaagagaccgaa
actgggcagctcacgaaaatgatacagccaatcaccaccctccctctctcgtcctcccat
agggtttcccaaatatcgttccacccgactctcccgtatctcgccgtacagtcccacgat
cggtctgtcgagctcttccgtatccggactgaagaagaagtgaggaaaaagcaggcgagg
cgtagaaagcgcgccaaggagaagaaagagaaacactctggtaagggtaaggacaagaat
ggggaagagggcgacgcggatatggacgagaacaaggggatcgaactcgtagacctgttc
acaccataccttgtcgtccgggccagcgggaagattaggtcgttcgacttcccgacttcg
gagtccagtctaaaggggaacactcagcttttcgttgccctgtcttccaatgcacttgag
gtgtacaatattcctccaccgacgaagtccaaagaggagacctcagaggctactcgcatg
tactctctcgatttgccggggcaccgcacggacgtcaggacgttgtcattgagctcggac
gacatgctccttgcatcggcctcgaatggctccgtgaaaatctggaatatgaagacgact
gcctgcatcaggacactagactgcggatacgcaatctgcagcaccttcttacccggtgat
aggcaggttgccgtcggtacgaaatccggcgatatcttcatctacgacctggcatcctcg
tcgttggtagagactattcaggcgcatacagcgaccgtctggtctatgcaggtccgctcc
gatggcatggcccttgtcactggtagtgcggacaaggatgtcaagttctgggagttcgaa
gaaaaggagagtactggtgttgatgcgcaggggcccaaattggtcacattggttcacgtc
cgtacactgaagatgacggacgatgtgctctccgtccggtacagcccgaacagaaagctc
gtggctgtctcgctgctggattcaactgtaaaagtattttatgaagacagcttgaagttc
ttcctctccctttacgggcacaaactgcctgtgctgtcgatggatatctcagatgactcg
aaattgatcgtgacatgctctgcggataagaatgtcaagatatggggtctcgattttggt
gactgccacaaatcaatatttgcgcatgacgagagcgtcatgcaggtggcgtttgagaag
aagtcgcattacttttggtcagtcggcaaggacaaaatgctgaagtactgggacggtgac
aagtttgagaacatccagaagttggaaggtcaccatggggagatatggacactggctgtg
agccacttcggtaattttgtggtcactgggtcacacgataagtctatccgagtctgggag
aagttggacgagccgctattccttgaagaagaacgagagcgagaactcgagggcctttat
gaaagcggaattgctgagtccatgaaccgtgaggatggacccataggtagtggagctgca
gacggcggtgaggcaccgacacaggcagaagctaccgcggtcttgaagcagactacggag
accctgatggctggcgagcgcatcattgaggcgcttgatctcgcagacgcagagcgggcg
gcgttcagggaatacgaagaagcgaaggcgtccttgagcccagaggaggcggagaagtta
ccgccccccgctaggaacgctgtgctcgcagcgtatgatgtgaccccagaagcgtgggtt
ttgcgcgtagtcgataaaattcccaatacagcgcttcaggacgcgctattggtcttgccc
ttcgggaaagtggtgtccttgatgaactatctcaacatgtgggcccagaaggagtggaac
atcattctcgtctcgcggatcatgttcttcctcctaaagacgcatcaccaccaaattgtc
gcaaaccggatcatgcgcaccacccttatgtcgctccgcaagcatctacggttcgtgctg
cagcggcagaaacagacgataggttataatctagccgcacttcaattcattcagcgtcgg
aacgacaccgaaaggacggcgcagttctatgaggaagaaggcatggacgaggagaaagtg
cgagcgaagattgccgaagggaagaagaggaaacgagtgagcatcaaagcttga

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