Gloeophyllum trabeum: GLOTRDRAFT_114053
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Entry
GLOTRDRAFT_114053 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_114053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_114053
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GLOTRDRAFT_114053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
DUF7310
ATG17_like
DinB_2
T2SSC
Motif
Other DBs
NCBI-GeneID:
19299828
NCBI-ProteinID:
XP_007862358
JGI:
Glotr1_1_114053
UniProt:
S7RWQ0
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MSAFGQNTSGTSGTASSTGSGLFGNTASGGTGGAPTKPAGSIFGNLGSSTSGGLFSTGTG
GNTTSSSPAPPAGGSLFGNSSTTANSSSPAPGGGLFGNSSSTPKPTTGGGLFGNTTTSSG
PSAAGGLFGSTSSSTPLATAGGSSATTNNSTSAPGSGLFGGTSGSSVTNPLFGGLGSSSS
TPSTQTQGTPNLFGGAPKPAEQSANSATQPATTSLFGNAPSTTTSSTLPGGSLFGHKPAD
SLNTASTPAAGTAAPGGGLLGGSLFGKKPDTPATGTTTTTSSTTAAPSLFSGLGSKDTTS
GKSDTPASAFSRSFPSSSGGLFGTPAASKDKPEEKKDAPAAGSSINIFGTAAKDTSGEKK
ELGSALTTSALGPPSTSNSTSIAVPPPSMLRGKTIEEIVNRWSSELEGHVREFHKFAGEV
AAWDRALIDNGNSLAALFSHVLAAEREQTNIDQALDHIEQQQKDLSAALDSYEKATEDIL
GGDNGSLRVLDTGPADSERDKNYVLATELHTHLDDLSSSLTQMIEAVNALSDTTPDGKPT
KQEGEDPMTQIVEILSSHLESLQWIDGSVRELETKVGEVEQRIKDSGTNLATGLGGAKSR
SFGLARSAY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgttcggccagaatacgtccggtacgagtgggactgcgtcctctacaggcagc
ggccttttcgggaatactgcaagcggtggaactggaggagccccgacgaagcccgctggc
agtatctttggcaacttgggctctagcactagcggaggattgttttctacgggcaccgga
ggcaatacgactagcagtagtcctgcacctccagctggaggcagtctatttgggaactct
tcgactaccgcgaactcctcatcaccggctccaggtggaggcctcttcggaaacagtagc
agtactccgaagcctactactggcggcggcttgtttggcaacacaaccacctcgagcggt
ccatccgctgcgggaggcctatttggcagcacctcaagctcgactcctctcgccaccgca
ggaggctcatcagcgacaaccaataattccacgtcagctcctggcagcggactattcggt
ggcacctctggatcctctgtgacaaatccattgttcggtggcctcggtagttccagttcc
acgccttcaactcagacgcaaggcacgccgaatctgttcggtggtgcacctaagcctgca
gagcagagcgcgaattccgcaacccagcccgcgacgaccagcctcttcggaaacgctccc
tcaacaacgacttcctcaacgttgccgggaggaagtttgtttgggcacaaacctgcggat
agcttgaacacggctagtaccccagctgccggtactgctgctcctggcggtggcctactt
ggcggtagcctatttgggaaaaaacccgatactcctgcaactggcaccaccacaaccaca
tccagtacgacagcggccccttccctgttttccggacttggtagtaaagatactacgtcg
ggaaagagcgatacccctgccagtgcgtttagcaggtcattcccttcctcatcgggtgga
ctcttcggaactcctgcagctagtaaggacaagccggaagagaaaaaggatgcgcctgca
gctggctcgtcaattaacatcttcggcactgctgcaaaggacacctccggcgagaaaaag
gaactcggttccgcgcttaccactagtgccttgggtcctccttctacctctaactctaca
tccatcgccgtccctccaccttccatgcttcgagggaagacgatagaagagatcgttaac
cggtggtcctcggaacttgaaggtcatgtacgcgaattccacaagttcgctggcgaggta
gctgcctgggatcgtgcattgatcgacaatggcaatagccttgccgcactattctcgcat
gttcttgccgctgagcgtgagcagacaaatattgatcaagcgctcgaccatatagagcag
cagcagaaggacttgtctgcggctctagactcgtatgagaaggccacggaagatattctc
ggcggcgacaacggtagcttgcgggtcttagatacaggcccggcggactctgagcgggac
aagaactacgtgctcgcaaccgagctacacacccacctggacgatctctctagttccttg
acgcaaatgatagaggccgtaaatgccttgtcagacactacgccagatggaaaaccaacg
aaacaagagggtgaagatcccatgacccaaatcgtggaaatcttgagtagtcatttggaa
agccttcaatggatcgacggctcggtacgggagctggagacgaaagtgggcgaagttgag
caaaggatcaaggattctggaacgaatttagcgacggggctgggtggagctaaatcacgg
agcttcgggttggctcgcagcgcgtactga
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