Gloeophyllum trabeum: GLOTRDRAFT_114522
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Entry
GLOTRDRAFT_114522 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K22382
WD repeat-containing protein 26
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gtr04121
]
GLOTRDRAFT_114522
Ubiquitin system [BR:
gtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GLOTRDRAFT_114522
CTLH complex
GLOTRDRAFT_114522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
LisH_WDR26
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT122_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
TPR1-like_2nd
Beta-prop_WDR75_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_SPT8
RMC1_N
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
19299895
NCBI-ProteinID:
XP_007863276
JGI:
Glotr1_1_114522
UniProt:
S7QEW1
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MPSSEDRIPKYGADSLPATRSISSDGYAHRSMIDSAAEAGPSSVGLDRGSPKLVVANGHS
SSTKGYANGSLSPTNGVGAAPFKSMSTNGKSAASSISRVNLPGTTLYDDSFVDREEFVRL
VIQSLRDVGYIESAATLEAESGYAMETPEVSDFRQCILEAAWEEAERALVRLGVTEEDGL
WEAKFLISQQKYLELLEAENTTAALQVLRNEIAPLQVESDQLHSLSSLMMCSDAADLRQR
AGWDGALGTSRRRLLSNLQRYIPSSLMIPPRRLSTLLSQSLLYQQSHCLYHNVPLSLTSP
NPRSHFSLYMDHHCDREKHLPRATTAILDGHVDEVWAVEWSHCGTRLATAGSDRCALIWR
IGPEKDVSARTYTVDFVLREHQYAVGYLAWSLDDSILLTASDDCVRMWNTTSGICIRVLK
EHSDTVTSLAWLPDGTGFISGGLDRKIILWDVDGNRRDSWGTTSIRVTDLAVTPDFTRVV
AVGMHYLAPTGLASSTGASRSESSTPPTGGGGARPNPPTRDSENRMIIYDLASKQTEASI
RLDGETTSVKISPDSQYALINQAPDEIHLWDLSTCRIARKFTGQRQGRHVIRSCFGGVDS
NFIVSGSEDGNVYIWHRDSGVLLEVLSGHGAGSVNSVSWNPKNERMFASCSDDHTIRIWE
ALDTTERGLPSTEELSDTVIGKGKGKSRERLNSHSDDGGSGSGAF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccatcatctgaagatcgaataccgaagtacggcgccgacagcttgcccgccaccagg
tcgattagctctgacgggtacgcgcaccgttccatgatcgactcggccgcggaggcgggt
ccctcctccgtcggcttagacagaggttcccccaagcttgttgtagccaacggccatagc
tcatcgacgaagggatatgccaatggatcgctaagcccgactaacggcgttggtgcggcg
ccgttcaaatcaatgtcaacaaatggcaagagcgctgcatcgtctatctcgcgagttaac
ctccctggaactacattgtacgacgactcatttgtggaccgggaagaattcgtgaggctc
gtgattcagagcttacgcgatgtaggctacattgagtccgctgcaacgctggaggcggaa
tctggatatgccatggaaacgccggaggtatctgactttcgacagtgcatacttgaggca
gcttgggaggaggcagagcgggcgttggtacgattaggtgtgacggaagaggacggtcta
tgggaagcgaagttcttgatcagccagcagaagtacctcgagctcctggaagccgagaat
actactgctgcattacaagtactgcgaaatgaaattgcgcccttacaagtggaatccgat
caattacactcgctgtcgagtcttatgatgtgctcagacgctgcggatctacggcagcga
gctgggtgggacggcgcattaggtacttcgagacgccgactattgtccaatctacaacgc
tacatcccctcatcactcatgattcctccacggcgcctctcgacactgctttcccaatcc
cttttatatcagcaatcacactgtctatatcacaacgtcccgctctccctcacgtcaccc
aaccctcgatcacatttctcgttgtatatggatcatcactgcgatagagagaaacacttg
cccagggcgacgactgcgatcttggacgggcacgtggatgaggtatgggcggtcgagtgg
agtcactgcggaacgagacttgcgactgcggggagtgataggtgtgctttgatatggaga
atcgggcccgagaaggacgtctcggccagaacatatacggtggattttgtcctgcgtgaa
caccaatatgccgtaggatacttggcatggtcgttggacgattcgatactcctcacggcg
tcagatgactgcgtgcgaatgtggaataccacctctggtatatgcatacgagtccttaag
gaacactcagataccgtgacttcccttgcatggctaccagatgggactggcttcatttcg
ggtggcctggatcggaagattatcctttgggacgtggacggcaaccgacgagatagttgg
ggaacaacctcgattcgggttacagacctcgctgtgactccggacttcacgcgggtggtc
gccgtgggcatgcactacctagcgcccacgggcctggcctcatcgactggtgcaagtcga
agtgagagtagtacccctccgaccgggggcggtggtgcgaggcccaatccaccgactcga
gactccgagaaccggatgatcatctatgacttagcttcgaaacaaacggaagcgtcaata
cgtcttgatggtgaaacgaccagtgtgaagatctcaccggactcgcaatatgcactgatc
aatcaagcacctgatgagatccacctttgggacttgtcaacatgtcgcattgctcgcaag
tttactggtcaacgtcaaggacgtcacgtcattcgcagctgttttgggggggtcgatagc
aacttcattgttagcggaagtgaagatggcaacgtctacatctggcatcgagacagtggt
gtccttctagaggtactctctggtcacggtgcggggagcgtgaactccgtttcatggaat
cccaagaacgaacgcatgtttgcctcatgctcggacgaccacacaatccggatatgggaa
gcgctcgatacgacagaacgtggtcttccgagcaccgaggagttgtccgacacagtaatc
gggaaagggaagggtaagagcagagaacgcctcaatagccattcggacgatggaggcagc
gggagcggagcattttaa
DBGET
integrated database retrieval system