Gloeophyllum trabeum: GLOTRDRAFT_114864
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Entry
GLOTRDRAFT_114864 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03030
DNA replication
gtr03410
Base excision repair
gtr03420
Nucleotide excision repair
gtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLOTRDRAFT_114864
03410 Base excision repair
GLOTRDRAFT_114864
03420 Nucleotide excision repair
GLOTRDRAFT_114864
03430 Mismatch repair
GLOTRDRAFT_114864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_114864
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_114864
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_114864
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GLOTRDRAFT_114864
DNA Replication Termination Factors
ELG1-RFC complex
GLOTRDRAFT_114864
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GLOTRDRAFT_114864
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GLOTRDRAFT_114864
Check point factors
HRAD17(Rad24)-RFC complex
GLOTRDRAFT_114864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_2
AAA_assoc_2
AAA_11
RuvB_N
AAA_24
AAA_16
AAA_5
AAA_7
SLFN-g3_helicase
Mg_chelatase
AAA_30
DEAD
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
19299947
NCBI-ProteinID:
XP_007863614
JGI:
Glotr1_1_114864
UniProt:
S7QF24
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MDKFFQPQAPRQSKAQKQAADSQLQPWVEKYRPKTIDDVTSQEHTVAVLQKSLLSTNLPH
MLFYGPPGNGKTSTILALARQLFGPDNFRTRVLELNASDERGISIVREKIKDFARQTPRA
QAVSSDGKTYPCPPYKIIILDEADSMTQDAQAALRRIMETYARITRFCLVCNYVTRIIEP
LASRCSKFRFKPLDPGSTSSRLSHIATCEHVDASPDVISALINTSQGDLRRSITYLQSAS
RLSSSTVPPTPITARDIQEIAGVVPDVVINDFVATLGVEGTNDMDIDPSPGSGSKSNFDA
IRKKVKEVVREGYSASQLLSQLHDLVILHPTITARQKARCALVFAEADKALCDGADEELW
ILEVALRIHKALS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggataaattctttcagcctcaagcacccaggcaaagcaaagcgcagaagcaagcggct
gattcacagcttcaaccctgggtcgagaaataccggccgaaaacgatcgacgatgttaca
tcgcaagaacatactgtagcggtcttacagaaatccctactgtctacaaatttgccacac
atgctcttctatgggcctccggggaacggcaaaacttctactatcctcgctcttgcgagg
caactgtttgggcccgacaacttccgaacgcgcgtcctagaactgaatgcgtctgatgaa
cgaggaatatccattgtaagggagaagatcaaagacttcgctcgccaaactccccgtgca
caagctgtctcctcggatggcaagacttatccctgccccccatacaagatcattattctg
gacgaggcggactcaatgacccaagatgcccaggctgcccttcgacgcataatggagact
tatgcacgaataacccgtttctgcctggtttgcaattatgtgacccgaatcatcgagcca
ttagcctcccgctgctcgaaattccgcttcaaaccccttgaccccggttcgacatccagc
cgactatcccatattgcgacttgcgagcacgtcgatgcgtcgcccgatgtcatatccgct
ctcatcaacacctcccaaggtgacttacgtcggtcaataacatatcttcagtcagcgtcc
cgtttatcatcttcaacggttccgccgacacctatcactgcccgcgacatacaggagatc
gctggggtagtgccagacgtagtgattaatgactttgtagcgacactaggcgttgagggc
acgaacgacatggacattgatccttcacctggctcaggtagcaagtccaactttgatgcc
atacggaagaaagtgaaagaagtagtccgagaaggatattctgcctcacagttgctctca
cagttacacgacctcgtcattttacacccaactataactgcccggcagaaagctcgatgt
gctctcgtctttgccgaagctgacaaggcgttatgcgacggcgcagatgaggagttgtgg
attttggaggtagccctacgcatccacaaagccctttcatga
DBGET
integrated database retrieval system
