Gloeophyllum trabeum: GLOTRDRAFT_115799
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Entry
GLOTRDRAFT_115799 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GLOTRDRAFT_115799
Enzymes [BR:
gtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
GLOTRDRAFT_115799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF6945
Motif
Other DBs
NCBI-GeneID:
19300097
NCBI-ProteinID:
XP_007865321
JGI:
Glotr1_1_115799
UniProt:
S7QBA3
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MQMFSALFTLLAIVLYARGAPLSGNKTEPHLVARSFGLTVSGNSYVVDTAGGLVFTVNNQ
NCDITSLNYNGIEAQDQSKYSQISSGLGSATVSWTKIGNYIKITCETSTLTQYIVAQYKT
AAVHMATYTTAEPSVGELRFIARLNRATVTTGPTQSDIKGGTAIEGSDVFEVGSQTRSKF
YSSKRFIEDQVHGATGSGIGVFMIIPGYSYETSSGGPFFRDIDNQGGDQQEVYFYMNSGH
VQTEDYRQGLHGPYLLQFTSGSTPSTAVDLDFWEGLDIKGQTTFANRGYVKGTATGVQSG
LPIVLGWANSAAQYWVQADSSGGFTSPKMKPGTYTQTLYQGELAVATFSVTVQVGKTVTA
NIASTLASHSPIFQFGDYDGTPKGMLNADMIETMHPSDGRMHDWVRTVTISQGTGYFPMA
VFKDIGTVTISATLTSSQLGARTLLIGTTLAFAGGRPHVKVNDWDGPNPGAPSQPDSRGV
TRGTWRGNNIAYTVSIPDGVLVKGSNTIIISVISGSSGSQYLSPNFVFDTVMLY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgttctctgccctatttacccttttggcaatcgtgctttacgcgcggggagca
ccactgtcgggaaacaaaacagagcctcacctcgtagcgaggagctttgggctgactgtc
tccggaaattcttacgtcgtggacaccgccggtggcctcgttttcaccgtcaataatcag
aactgcgacataacatctttgaactacaatggcatcgaggctcaggaccagagtaaatac
tctcagatttcctctgggcttggctccgccacagtgtcctggacgaagatcggtaattac
atcaaaattacctgcgagacaagcaccttgacgcagtatattgtcgctcagtacaagact
gccgcagtccacatggctacttacaccactgcggagccctcggtgggcgaactcagattc
atcgcccgcctcaaccgcgctacggttaccactggtccgacccaatccgatatcaagggc
ggcactgctatcgaaggctcggacgttttcgaggtcggcagccagactcggagtaaattc
tattcctccaaacgattcatcgaagatcaagtacatggcgccactgggagtggtatcggt
gtattcatgatcatacctggatacagctatgaaacttcatccggtggacctttcttcaga
gacattgacaaccaaggcggcgaccagcaagaagtctacttctacatgaactccggacat
gtacaaactgaggactaccgacagggcttgcacggcccttacctgttgcaattcacctcc
gggtctacgccttctactgctgttgacctcgatttttgggaaggattagacataaagggt
cagaccaccttcgcgaaccgcggatacgtcaaagggactgcaaccggcgtacagagcggc
ttgcccatcgtactcggctgggcaaactccgctgctcagtattgggtgcaagcggactcg
agcggcgggttcacgtcgccgaagatgaaacccggaacgtacacgcagacgctgtatcag
ggagaactggctgtcgctacttttagcgtcacggttcaggttgggaagacggttacggcc
aatattgccagtactctggcatcgcacagtccgatattccagttcggagattatgacggg
acgccgaagggtatgctgaatgccgacatgattgagaccatgcacccttctgatggccgt
atgcacgattgggtcagaactgtcactatttcacaaggcacagggtatttccccatggca
gtgttcaaagacattgggaccgtcactatcagcgcgaccctaacgagctcgcagctcggg
gcgaggactctacttattggtaccacactcgcgttcgccggcggtcgaccgcatgtgaag
gtgaacgactgggatggccccaaccctggggctcccagccaaccggattcgaggggggtt
actcgaggcacttggagaggaaataacatcgcttacaccgttagcattcccgatggcgtc
ctcgtgaaaggctcgaacaccattatcatctccgtcatttcaggctcatctggcagccag
tacctgtcccccaactttgtcttcgacaccgtaatgctctactga
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