Gloeophyllum trabeum: GLOTRDRAFT_116317
Help
Entry
GLOTRDRAFT_116317 CDS
T03130
Symbol
pks1
Name
(RefSeq) polyketide beta-ketoacyl-synthase
Organism
gtr
Gloeophyllum trabeum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
SAT
CurL-like_PKS_C
Thioesterase
PP-binding
RhiE-like_linker
PS-DH
KAsynt_C_assoc
PKS_DH_N
Thiolase_N
Abhydrolase_6
Methyltransf_2
Motif
Other DBs
NCBI-GeneID:
19300169
NCBI-ProteinID:
XP_007866703
JGI:
Glotr1_1_116317
UniProt:
S7RNP0
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MSSVVVHTPRFADVPVFAGQGTAAASSPQTREQALRDAESASGTLLLTACYQAFLTEFAS
LSPTEMEQVDIDPADFDTVQSLLAALPARYQRNTVFATTTLFLIQSLRYLAHIESLSTEK
KTSPFADYLKSNAAQGLGVLGFSSGILPACVVGTSNTTVSYIAHAVEAYRLAFWIGVRCQ
LYRVAALEAEDAPGKECTLPWSLVFMGMNKKVAQDAIEEFQRKNTGLSPLYITAVMDDSS
VTISGRPDVLAKFSAELPSGSSVHMTSITTLYHAPSHKEGVRSEILHDVIRRGIHFPTFA
EIVFPIRSTYTGQLIDESCDVAAGYGTLVEAAVDMIVAQPVNWDIVVDEVIKALPAEGRI
ALLNLGPGAGMARSMERAFPKDKVVSIDISTRVAREASKIDTAKYEPIAVVGMAVNMPGA
PNTNQLWEVLEKGINTISEVPSDRFDVRDYNDPKDPKTNRQMKAHTGNFLSNADQFDNKF
FKISPREARSMDPQQRVLLHVAYEALENAGYVPNATETFAQDSFGCYIGVATNDYVQNLR
NDIDVYYSTGTLRAFLSGRISYAFQWSGPSLVIDTACSSSMVAIYQACRALMNRDCNAAL
AGGVNVISSPDMFLGLDRGHFLSPTGQCKAFDASADGYSRSEGCGLFVLKRLSDAIAEGD
NIMGVIRGIDVNQSGNAHSITHPHAPTQATLFKRVLEATGIDPTRINVVEAHGTGTQAGD
PNELESIRSIFAIRRAKENPLHITSIKANIGHLEAASGSAGLAKLLLMLRHRAIPRQVSL
KNLNPRIAPLEADNTIIDREMVPWEPSQPGLPRIAMLNNFGAAGSNGTMLLEEFPAADES
KYEPAGLAYLFGLSAKTDTALNELKKKYVDWLQDPASDDVRFADIAYTATARRIMYAHRT
AVVATDKKDLIQKLESTKLVAVPGESKPSKTVFVFSGQGGQYLGMGGELYRTNPLFKHHI
DECHEVLRTMGFPGVTQIIATESGESGLSKLEEFEAYQGAIFALEYALAKLWMSWGVKPD
AVVGHSLGEYAALVIAGVLTLKGALTIVANRVRLMVTKCATESTGMIAINQGPAAVKDIL
QSNAALSGCSIACYNSAGDCVVAGPLEQLKALKAHLDSEVKCKNVLLSVPFGYHSTAMEP
LLDDLISVAKRVTLRPPTLAVISNVFGEVVRPGDASVFTSEYFARHCAEPVQFERGINAF
CATSEFANVGLWVEIGPHPTTLPMLKSNPSVPKDGLLLPSIRKNQDVWLTLMTSLSQLYT
TDRSLAWREVFAHVPAVKCVDAPSYPFSPSRFWIDYKEEAPGLVASDRKTLTSSARLVSE
SSMLHAWAQEPSAANGNVAIFETPIEMLAGSIRGHSVGGMPLCPASVYIEQVLAGVQLAR
EHLGLGSTGHHLVVKDVQFAHPLVYAEGVARLVKTKITLDDGAESGNFTVSSSVDGAEES
VHVHGTFRLETNTKTTTKFGRVAPVIHRQMATVATPVGPGYETFSTRTAYEVIFPRVVDY
SREYHTMQSLTVDPSGMEGYAVVKLPADHFRGRFIVHPVFMDTLLHVAGFVANMQGGIND
AYICSQVDSVKVIPDLVDNDATYGVFCRNAWLADEGVMLADAYAVELTGAKRIVGHLKGM
HFRRVRLTSLKKGLQMASGRPAEVTPSRVTFAPSKPSSHKVVSRTPSSSSTSSSTVHDVQ
AAVVGIIAETCGIDPANVKLETCLDSLGEPDVKGLLASVLGIPPKEITDDADFDALGLDS
LTSIEALQALRTEFGLDLPSNFFQTNSTPKAVDLPLFLVHDGSGLVNYYERLSPLDRNIW
GIHNPNFITGQAYDSVVAMASEYADLITKTASGPILLGGWSFGGVAAFEIARQLLRKGVP
VKGVLLIDSPSPVNHVPLSQSLIEAVVNLDARGANSDIGRLVKAQFEKNSALLGKYDPVS
AGGPFPPLVLLRSREGFNPSGVKEPVPTWLADRSNAQQAVAGWEGLVGATVKSIDIPGNH
FEPFHASNIAEVSCRIADGCQYLESL
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgtcgttgtgcacactcctcgattcgccgacgtccctgttttcgctgggcag
ggcaccgcggctgcgagctcgccacagacccgcgagcaggcgcttcgagatgctgaatcc
gcttctggaacccttctccttactgcatgctaccaggcgttcctcaccgagttcgccagc
ctatcaccgaccgagatggagcaggtcgacatcgaccctgctgactttgacaccgtccag
tcgctcctcgctgccctccccgcgaggtaccagcgcaacaccgtcttcgccaccaccacc
ctcttcctcatccagtccctgcgctatcttgcgcacatagagtcgctctccaccgagaag
aagacgtcgccgtttgccgactacctcaagagcaacgccgcgcagggcctgggcgtcctc
ggcttttcgtcgggcatcctccctgcctgcgttgtcggcacttccaacaccactgtttcg
tatatcgcccacgccgtagaagcttatcgtctcgccttttggattggcgttcgctgccag
ctctaccgtgttgcggctttggaggccgaagatgctcccggcaaagagtgcaccctgccc
tggagccttgttttcatgggcatgaacaagaaggtcgcccaggatgctattgaagagttc
cagaggaagaacactggtttatctcctttgtacataactgctgtaatggacgactcaagc
gtcacgatctccggcagacctgacgttttggccaagttttctgctgagcttccctcgggg
tcgtctgttcacatgacctccatcacgaccctctaccacgcgcccagccacaaggagggc
gtccgctccgagatccttcacgatgttatccgccgtggtattcacttccccaccttcgcc
gagattgtctttcctatccgttccacgtacactggtcagctcatcgacgagagctgcgac
gttgcggcgggatacggtactctagtcgaggccgcggtcgatatgatcgtcgcgcagccc
gtcaattgggacattgtcgtcgacgaagtcatcaaggcactcccggctgaaggccgcatc
gccctgctcaacctgggcccaggcgccggtatggcgcgcagtatggagcgcgccttcccc
aaggacaaggtcgtctccatcgatatctcaacccgcgtcgcccgcgaggcctccaagatc
gacacggccaagtacgagcccatcgcggttgtcggcatggcagtcaatatgcccggcgcg
cccaacaccaaccagctctgggaggtgctcgagaagggcatcaacactatttctgaggtc
ccgtcggacaggttcgacgtgcgcgactacaatgacccgaaagatccgaagacgaaccgc
cagatgaaggcccacacgggcaacttcctgtccaacgcggaccagttcgacaacaagttc
ttcaagatcagcccgcgcgaggcgcgctccatggatccgcagcagcgcgtgctcctccat
gtggcgtacgaggcgctcgagaatgccgggtatgtgcccaacgcgaccgagacgttcgcg
caggactcgttcgggtgctatattggcgtcgcgacgaacgactatgtgcagaatctgcgc
aatgacatcgatgtctattacagcactggtactctgcgcgctttcctgagcgggcgtatt
tcctatgcgttccagtggagcggcccgtccctcgtcatcgatacggcatgctcgtcttcc
atggtcgcgatctaccaagcgtgccgcgctctgatgaaccgggactgcaacgcagctctg
gctggcggtgtcaacgtgatcagtagccctgacatgttcctcgggcttgacaggggacac
ttcctaagccccactggtcagtgcaaggcctttgacgcctccgccgatggatactcccgc
agcgagggctgcgggctcttcgtcctcaagcgcctctcggacgcgatcgccgagggcgac
aatatcatgggcgtcatccgcggcatcgacgtcaaccagagtgggaacgcgcactccatc
acgcacccgcacgcacccactcaggcgacgctcttcaagcgcgtcctcgaggcgaccggc
attgaccctacccgcatcaacgttgtcgaggcccatggcacgggtacacaggccggagac
cccaacgagttggagagcattcggagtatctttgctatacgcagggcgaaggagaatccg
ctgcatatcacatcgatcaaggcgaacattggccatttggaggccgcgtcgggctctgcg
ggtctcgcgaagctgttactgatgctgcgccaccgcgcgatcccccgccaggtctcgctg
aagaacctgaacccgcggatcgcccctctcgaggccgacaacaccatcatcgatagggag
atggtgccatgggagccttcgcagcctggtctgccccggattgctatgctcaacaacttc
ggcgctgccggttctaatggaacgatgctgctcgaggagttcccggctgctgacgagagc
aagtacgagccggctggtctggcgtacttgttcggtttgtccgccaagactgacactgcc
ttgaacgagctcaagaagaagtacgttgactggctccaggaccctgcttccgacgacgtc
cgcttcgccgatatcgcctacaccgctaccgctcggcgcatcatgtatgcgcatcgcacg
gctgtcgtggctactgacaagaaggacctgatccagaagctcgaatcgaccaagctggtc
gcagtacctggggagtcaaagccgtcgaagacggttttcgtgttctccggtcagggtgga
caatacctgggcatgggaggcgaactctaccgcaccaaccccctattcaagcaccatatc
gacgagtgtcacgaggtcctgcgcaccatgggattccctggggtcacgcagatcatcgcg
acagaatctggggagagcgggctctccaagctcgaggagttcgaggcgtaccaaggggct
atatttgctctggaatatgcactcgcgaagctttggatgtcttggggagtcaagccggat
gcggtcgttgggcacagtctcggtgaatacgctgctcttgtaatcgccggtgtcctgacg
ctcaagggtgcattgactattgtggcgaaccgggtccgcttgatggtgaccaagtgcgcg
acggagtctaccggcatgatcgccattaaccagggaccggctgctgtgaaggacatccta
caatccaacgcggcgttatccggatgctcaattgcttgctacaacagcgcgggcgattgc
gtggtggcaggacctctcgagcagctgaaggctctgaaagctcacctggactcggaagtc
aagtgcaagaatgtgctcctctccgtgcccttcggataccatagcactgcgatggagcct
ctgctcgatgacctgatcagcgtagccaagcgggtcactttgcgtcctccgacgttggcg
gtcatctcaaacgtttttggcgaggtcgtccgtccaggggacgcttcggtctttacttcg
gaatacttcgccagacactgtgcagagcccgtccagttcgagcgcggtatcaacgccttc
tgcgctacatccgagttcgccaatgtcggtctctgggtagagattggtcctcacccgacg
acgttgcccatgctcaagtccaacccctctgtcccgaaggatggcctgctcctgccttcc
attcgcaagaaccaggatgtatggttgacactcatgacgtccttgagccagctgtacacc
actgatcggtcattggcttggcgcgaggtcttcgctcacgtccctgccgtcaaatgcgtt
gacgccccgtcttaccccttctcaccgagccgcttctggatcgactacaaggaggaggcg
cccggattggtcgcatccgacaggaagactctcacttcttccgcccgtctggtgtcggag
tcctctatgctccatgcatgggctcaggagccttcggcagcgaatgggaatgttgctatc
ttcgaaactccgattgagatgctcgcaggttcgattagaggacacagcgtaggtggcatg
cccctctgccctgcatctgtctatatcgagcaggtgttggctggtgtacaacttgcccgc
gagcacctgggcctcggctccaccggccatcatctcgttgtcaaggacgttcagtttgcg
caccctctcgtttacgctgagggtgttgcgcgactggtaaagaccaagatcaccctggac
gacggagccgagtctggcaactttaccgtgagctcgtccgtcgatggtgctgaggagtcg
gtgcacgtccacggtaccttccgcctggagacgaacacgaagacgacgacgaagtttggt
cgtgtcgcgcctgtcatacaccgtcagatggcgaccgtcgcaactcctgtcggtccgggc
tatgagacgttttcgactcggactgcgtacgaggtaatcttccctcgcgtggtcgactac
tccagggagtatcacactatgcaatctctgactgtcgacccctctggtatggagggatac
gcggtcgtcaagctccctgcagatcacttccgcggcagattcatcgttcaccctgttttc
atggacaccctcctgcacgtcgccggcttcgtcgctaacatgcaaggtggcattaacgac
gcttacatctgcagccaagtcgacagcgtcaaggtgatccccgacctcgtggacaacgat
gcgacttacggtgtgttctgccgcaacgcctggctcgcggatgaaggagttatgctcgcc
gacgcttacgcggtggaactcactggcgcgaagaggatcgtcgggcatctcaagggcatg
cacttccgccgtgtccgcctgaccagtctcaagaagggtcttcagatggcttccggacgt
cccgcagaagtcacgcctagcagggtcaccttcgctccgtctaagccttcgtctcacaag
gtcgtcagccggactccctcaagctcttcgaccagctcctccaccgtacacgacgtgcag
gccgccgtcgttggcatcatcgcggagacttgcggtatcgacccggccaacgttaagctc
gagacgtgtctcgactcgctgggtgagcccgacgtcaagggcctgctcgcgtcggtcctc
ggcattccgccgaaggagatcactgacgatgctgacttcgatgcgctcggcttggactca
ctgacctccatcgaggcacttcaagcactccgcactgaattcggcctcgacttaccttcc
aatttcttccagactaactcgacccccaaggccgtcgacctccctctgttcctcgttcat
gatggtagcggtctcgtgaactactacgagcggctgtctcctctcgacagaaacatctgg
ggtattcacaacccgaacttcatcaccggtcaggcatacgacagcgtcgtcgccatggct
tccgagtacgctgacctcatcacgaagacggcctctggccccatcctgcttggaggatgg
tcattcggtggtgttgccgcattcgagatcgctcggcagctgctgcgcaagggcgtgccc
gtgaagggtgtcctcctgattgactcgcccagccctgtcaaccatgtcccgctgtcgcag
tccctcatcgaggccgtcgtcaacctggatgcgcgcggcgcgaactccgacatcggacga
ctagtcaaggcgcagttcgagaagaactctgcgctccttggcaagtacgaccctgtctcc
gcgggtggtcctttccctccccttgtcctgctccgctcgcgcgaaggcttcaacccctcc
ggcgtgaaggagccggtgcctacgtggctggccgatcgctccaatgcccagcaggcggtc
gcgggatgggagggtctggtcggcgcgaccgtgaagagcatcgatatccctgggaaccac
tttgagccgttccatgcttctaacattgctgaagtttcttgccgcattgctgatggctgt
caatacctcgaaagtctgtga
DBGET
integrated database retrieval system
