Gloeophyllum trabeum: GLOTRDRAFT_116530
Help
Entry
GLOTRDRAFT_116530 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03420
Nucleotide excision repair
gtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GLOTRDRAFT_116530
09124 Replication and repair
03420 Nucleotide excision repair
GLOTRDRAFT_116530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gtr04121
]
GLOTRDRAFT_116530
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_116530
Ubiquitin system [BR:
gtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
GLOTRDRAFT_116530
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GLOTRDRAFT_116530
TCR (transcription coupled repair) factors
Cul4-CSA complex
GLOTRDRAFT_116530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
19300196
NCBI-ProteinID:
XP_007866993
JGI:
Glotr1_1_116530
UniProt:
S7RPG3
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MRVVTTFHSPSSVVASVKCRLSPDGEHLVVAKPDRVEVHALGEDALKYECSLEIWGRVVS
VKELPRYGSTYSNVILLTDHPAPRLYVLSLSTAASGQAELVVAHSLTLTERLARPQEFYC
DVLVDPEGQVAVVSCYAGKLKVVEFDNGEYKSDFDAQFPEYNLLSMCFLPTSSDTYCLGL
LHVDYEGKLQLLSRDLSLADYELFAAPSTLLPSTALSASAFLSIEPAPTLIPISASEEEE
YAGGVLVVGGRKVLLYELASQDLQDKHKGKRRRLEGKKKSANREEAERAREEEKARERKR
RKPRASVEWPWSEVTAWCFVDEEGKRVLLGDGFGRLALLSVDTDKPLLTLLPLGTTSPPT
CLSYLNNQIFYLGSHYGDPQLLRIHPSPASSLDADTLPIPSKISTITSAELVSGAKGKGK
EADTTGYVLRTRGTYVQELQSWQNVAPIIDAVVADVDGSGQRTIVTCSGGKSTGSLRVIR
NGADFHELAALRGLAHVTHVWPLRSRFETPTHSHILASTPTQTHVFRIDGAEVFTSTAGG
FATDTRTLAVGNLARRMRKPGQAGSSYSDSPLVVQVTPGKVILSEFDQALGTFSRTGEEW
VPQSLKERHGEIVAASVNASQVVLGLSGGRLVVLNLDDNDKFNLAGQRLLEDGTKEIAAV
SCLPIDPSKYYSTQVAVAFWASNEVKVLSITSAQNYLTPVCATGPLPSLPRSVLLYNFGT
GVKSDSRDYVPHLLVGLADGTALAFVYKDNTLSDKRVFSFGTGPVSLTPCEVDGKRSVFA
CAKRSGLLFWEKQRLQLSPMLVKGVVTVAPLNSDHFPSSFTLATTGGLTIGKMGHLDKMH
IRSFGLGLDNPHRIAYHPPSKVFAVACTRTEPRRTGEARPERGVLKLIDDATFEVLDEFQ
CDAEELISSLDVYEREDIQQPCFCVGTVNSRDEREPSSGRLLLLCSGAGRDGISRGSLFI
AASLQIKGCVYAITKVSDLVAAAVNSAVVLYRLQKSSTGILTYDFAYVSEWNHDYVLNSI
VPGLNGLVISDALSSVSVLDVKDSKLQRRAKDYSPLWPVAIQALDDQRIIAANVDCDLCT
FSLQLDQGRIVLQKDGAFHLGELVNKFVRGSLTTTEFSGDIPIEPREIFFTSSGRIGMVF
EMGSELSLHMSGLERNMGNVLIGAGGVVHSDWRAPTVAKSRVETQQQTSYGFLDGDFLEQ
FLSLAPSSLPAKSILSGSMEAEALKLPFVEIQHVLEKLHSMH
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgtaacgacgttccattcgccgtcctccgtcgtcgcttcagtcaaatgccgc
ctctcgccagacggcgagcacctcgtcgtagccaagcccgaccgcgtcgaggtccacgcg
ctcggagaggacgcgctcaagtatgagtgcagcctcgagatatgggggcgggttgtctcg
gtgaaggagctcccgcgatacggatcgacgtactcgaacgtgatcctgctcacggatcac
cctgcgccgcgcttatacgtcctatcactgtccacggcagcctcgggacaagcggaatta
gtggtagcgcactcgctcacccttaccgagcgccttgcgcgcccgcaggagttctactgc
gatgtgctcgtcgaccccgaggggcaggtcgccgtcgtgagctgctacgccggcaagctc
aaggtcgtggagttcgacaatggggagtacaagagcgacttcgacgctcagttcccggag
tacaacctgctgtccatgtgcttcctcccgacgtcctcagacacgtactgcctcggcctg
ctgcacgtcgattacgagggcaagttgcagctactctcgcgcgacctcagcctcgccgac
tacgagctgttcgccgcgccctcgacgctcctcccgtccaccgcgctctccgccagcgcc
ttcctttccatcgagccggcgcccacgctcatcccgatctccgcgtcggaggaagaggaa
tacgcgggcggcgtgctcgtcgtgggcgggcgcaaggtgctgctgtacgagctcgcgagc
caggacctgcaggacaagcacaaagggaagaggaggcgcctcgagggaaagaagaagagc
gcgaatcgcgaagaggcggagcgcgcgagggaggaggagaaggcgagggagcggaagagg
cgcaagccgcgcgcgagcgtcgagtggccgtggagcgaggtgactgcgtggtgctttgtg
gatgaggaggggaagcgggtgttactcggggatggctttggcaggctggcgttgttgagc
gtggatacggacaagcctcttttgacacttctacctctgggaacgacatcccctccaacc
tgcctatcctacctaaataaccaaatattctacctggggtcccactacggcgacccgcaa
ctcctgcgcatccacccgtcacccgcctcgtccctcgacgcggacacactccccattcct
agcaaaatttcaacgataacatccgcagagcttgtcagcggcgccaaaggcaaggggaag
gaggccgacacgacggggtacgtcctcaggacgcgcggcacgtatgtgcaggagctgcag
agctggcagaacgtcgcgccgattatcgacgcggtcgtggcagatgtggacgggagcgga
cagagaacgattgtgacatgttctggaggtaagagcactggctcgctcagggtgatcagg
aacggcgcggatttccatgagctcgcggcgctaagagggctcgcacacgtcacccacgtc
tggcctctacgatcccgtttcgagacaccgacccattcgcacatcctcgcatccacgcct
acacagacgcacgtcttccgtatagacggcgcggaggtgttcacctcgacagcgggcgga
ttcgcgacggacacccggacgctggcggtgggcaacctcgcgcggcggatgcgcaagccc
gggcaggcagggtcgtcctactcggactcaccgctggtcgtgcaggtgacaccggggaag
gtgatcctatcggagttcgaccaggcgcttgggacgttctccaggactggggaggagtgg
gtgccgcagtccttgaaagagaggcacggagagattgtcgcggcgagtgttaatgccagc
caggtggtgctgggcctcagcggcgggcggcttgtggttttgaatttagatgacaatgat
aagtttaatcttgcagggcaacggctcctcgaagatggtacgaaggaaatagcggcggtg
tcatgcctgcctatcgacccttcgaaatattactccacgcaagttgcggtagcgttctgg
gcatccaatgaagtcaaggtcctgtccattaccagtgcccagaattacttaacgcccgtc
tgcgccacgggtcctcttcccagcctaccccgttctgttttgttgtacaattttgggacg
ggtgtcaagtcggatagtcgtgactatgtcccgcacctcctggtcgggttagccgatgga
accgctctagcgttcgtgtacaaagacaataccctctccgacaagcgagtattttcgttt
ggcactgggccggtgtcgttaacgccatgtgaggtggacggaaagcggtcagtcttcgcc
tgtgctaagaggtcggggctgctattctgggagaaacagaggctgcagctatcgccgatg
ttggttaagggagtggtgacagtggcacctttaaatagtgatcacttcccctcgtcattc
accttggccaccacaggcgggttgaccattgggaagatgggtcatctcgacaagatgcac
atacgatcgtttggcttgggtctggacaatccccaccgtatagcgtatcatccgccgagc
aaggtctttgctgtcgcgtgcacgaggacagaaccgcgaagaacgggagaggcgagaccg
gagcgcggggtgctgaaactgatagacgatgcgacattcgaagtcctggacgaattccag
tgcgacgctgaggagctgatatcctccctggatgtttacgagagggaggacatccaacag
ccgtgtttctgtgtcggcaccgtcaattcgcgagatgagagggagccgtcaagcggtcgt
ctccttttactctgcagtggtgcaggacgggatggcatctcgagaggcagtctattcatc
gcagcatctctgcaaatcaagggctgtgtttatgctataactaaggtcagcgacctggtg
gcggcagcggttaactctgcggtggtgctataccgcctgcagaagtccagtacaggcata
ttgacctatgacttcgcatatgtaagcgagtggaatcacgattacgtcttgaacagtatc
gtacctggcttgaatggtctggtgatctcggacgctctcagctcagtttccgtcctggat
gtgaaagactccaagctgcagaggcgtgcgaaggattactctccgctatggcccgtcgct
atacaggcactggatgaccaaaggatcatcgcagctaacgtggattgcgatctgtgcaca
ttctccttacaactggatcaaggccgcattgtactccagaaggatggcgccttccatctg
ggcgaattagtgaacaaatttgtgcgaggttccctaacgacgacagaattctccggcgac
ataccaatagaaccgcgagaaatctttttcacgtcgtctggtcgcattggcatggtattc
gagatgggaagcgaactctccctacacatgtcaggcttagaacgtaacatgggcaatgtt
ttgatcggagctggaggggtggtccactcagattggcgagcaccgacggttgccaagtct
cgtgtggagacacagcagcagacgtcgtacggcttcttggatggcgatttccttgaacaa
ttcctttctctggcaccctcgtccctgccagccaagagcatcctttccggttcgatggag
gctgaggccttgaaactcccatttgtcgagatacagcatgtcctggagaaattgcacagt
atgcactga
DBGET
integrated database retrieval system
