Gloeophyllum trabeum: GLOTRDRAFT_116711
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Entry
GLOTRDRAFT_116711 CDS
T03130
Name
(RefSeq) AAA-domain-containing protein
KO
K14571
ribosome biogenesis ATPase
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_116711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_116711
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GLOTRDRAFT_116711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_33
AAA_5
TIP49
AAA_14
AAA_28
Mg_chelatase
RNA_helicase
AAA_2
NPHP3_N
ABC_tran
nSTAND3
AAA_3
NACHT
AAA_17
IstB_IS21
Rad17
TsaE
AAA_7
nSTAND_NTPase5
Cytidylate_kin2
AAA_18
Parvo_NS1
DUF815
Motif
Other DBs
NCBI-GeneID:
19300225
NCBI-ProteinID:
XP_007867378
JGI:
Glotr1_1_116711
UniProt:
S7RMV9
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MDLSGPNALNRSMQGLWSSHRRKVNLNTIPPPLSTSASPAPTPVNEDVLVATVQPGANGD
MEVAVPESSSALSKPADVQPASDAPPTSNKRKTRSSRAAGDESNKRTKLNSGSVAGKDYS
PPSTRLSDLGGISGCVEKMLELVAMPICHPEVYLYTGVQPPRGVLLHGPPGCGKTMLAHA
MAGELGVPFISISAPSIVSGMSGESEKTLRDTFEEAKRLAPCLLFIDEIDAITPKRESAQ
REMERRIVAQFLTCMDDMSWDKTDNKPVMVVGATNRPDSLDAALRRAGRFDHEIAMGVPD
EEARAQILRVLCAKLRLEGAYDFSALAKATPGYVGADLAALTGAAGIIAVKRIFQELSNG
TLVIPDSEAPVVDSTVGDGMVIDGPPESQNDVTTSKPHVPFSSLLSASLSSAAASSIIHF
LQAHPNPLTEEQLSPICITHADFLQALKEVQPSSKREGFATIPDVTWAEVGALHGIREEL
HMAIVQPIKRPELFRAVGIEAGCGVLMWGPPGCGKTLLAKAVANESRANFISVKGPELLN
KYVGESERAVRQVFSRARASSPCVVFFDELDALVPRRDEALSESSARVVNTLLTELDGLD
SRKGVYVLAATNRPDMIDPAMCRPGRLDKLLYVDLPSADERVEIIRTVTRKVPLGSDSVR
GEVEEIVRERCEGYSGADLAAIVREAGVIALRRTLGKLEELEQGQDHGFLQEGNAQLLVE
VSDFVQAVDKIGPSVSTAQQRRYAALRNRYAGLPVAGGSKGKDDSLQQ
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggacctttccggtccaaatgctctgaacaggtcgatgcaaggcctctggtcgtcgcac
aggcgcaaagtcaaccttaacaccatccctcccccactttccaccagcgcatcacccgca
ccgactccagtcaatgaagacgtattagtcgcgactgtacaacccggtgcaaacggcgat
atggaagttgctgtaccagaatcctcgtctgccttgtcgaagccggcagacgttcagcct
gcctcggatgctccgccaacgtctaacaagcgcaagacacgttcttcacgggccgctgga
gatgagagcaataagcggactaagttgaactcgggctcggttgctggaaaggactactct
ccgccgtccacaaggctttcggatttgggtgggataagcggctgcgtagaaaaaatgctg
gagctggtagcaatgccgatatgtcatccagaggtatacctctatactggtgtgcagccg
ccgcgcggggtgcttctacatggacctccgggttgcgggaagaccatgctagcgcacgct
atggcaggggaacttggggttccgttcataagcatctcggcgccgtcaatcgtttctggc
atgtctggtgaatcggagaagacgttgcgggacacattcgaggaagccaagcgtttggca
ccttgtttattgtttatcgacgagatagatgctataacgccaaagcgcgagagtgcacaa
agagagatggagcggcggatagttgcccagtttctcacttgcatggacgatatgtcttgg
gacaaaaccgacaacaaacctgtcatggtcgtcggtgccacgaatcgccccgattctctg
gatgccgctctgcgtcgcgcaggccgctttgatcacgaaatcgcgatgggtgttccggac
gaagaagcacgggcacagatcctacgcgtgctctgtgcaaaattgcgcctcgaaggcgca
tacgatttcagtgccttagccaaagctacgccagggtacgtgggtgctgatcttgcagca
ctgacaggcgcagcaggcatcatcgctgtgaagcgcatattccaggagctgtccaacggg
acgttggtcattccagattcagaggcacctgtcgtagacagcacggtgggtgacggtatg
gtaatcgatgggccaccagaatcgcaaaatgatgttaccacgtctaaacctcacgtcccc
ttctcctccctcctctccgcctccctcagctccgccgccgcttcttccatcattcacttc
ctccaggcccacccaaaccccctcaccgaggagcagctctcccccatatgcatcacgcac
gctgacttcctgcaggcgctcaaggaggtgcagccttcatcgaagcgcgagggcttcgcg
acaatcccggacgtcacctgggcggaggtgggtgcgctgcacggaatccgcgaggagcta
cacatggcgatcgtgcagccgattaagaggccggaactgttcagggcggtgggtatcgag
gcgggatgcggtgtgttgatgtggggcccgccgggatgcgggaagacgttgctcgcaaag
gcggtcgcgaatgagagcagggcgaatttcattagtgttaaagggccggagctgttgaat
aagtatgttggagagagcgaaagagcggtccgtcaggtgttcagccgggcgcgggcttct
tctccttgtgtcgtcttcttcgacgagctggatgcgctagtgccgcggcgtgacgaggct
ctgtcggaatcgtcggctcgagtcgtcaacacgctgctcacggagcttgacggccttgac
tcccgcaaaggcgtctacgttcttgctgccaccaatcgaccggatatgattgaccccgcc
atgtgccgtccgggtcgtctcgacaagctcctatacgttgatttgccgtcagcggacgag
cgtgtagagattatcaggactgtcacaaggaaggtgccgctgggcagcgattccgtccgc
ggcgaggtcgaggagatcgtcagggagcgctgcgaaggctacagcggcgcagaccttgcc
gccattgtgcgtgaagccggggtgattgcactgcggcgcaccctcgggaagctcgaggag
ctcgaacagggccaggatcacggttttttgcaagaggggaacgcacagttgttggtggag
gtgtccgatttcgtccaagctgtggacaaaattgggcccagcgttagtacggcccagcaa
agacgttacgctgctctgcgcaatagatacgcgggcctgcctgtggccggagggtcgaaa
gggaaggatgatagcctgcaacagtag
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