Gloeophyllum trabeum: GLOTRDRAFT_116966
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Entry
GLOTRDRAFT_116966 CDS
T03130
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GLOTRDRAFT_116966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_116966
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GLOTRDRAFT_116966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
19300268
NCBI-ProteinID:
XP_007867882
JGI:
Glotr1_1_116966
UniProt:
S7RH53
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MSLMYGKEKESNQEIEHDPGFCSFFTKLPSKSPETGTIRLFSRPEGFYTTHGPDAQYVAT
HVFRTNSVIKYLGGGGKAGLPSVSLKESVAKTFLREALTTKQLRVEIWEPEPGQGKKPTK
FRLTKEASPGNLQAVEDLLFENSDMMSAPIVMAIKIASSVTAGSGKARTKAVGVAYADVS
IRELGVSEFVDDDLFSNTESLIIQLNVKEALITTGTASGKTERDVDLNKLKAVLERCGVV
VTERKPSEFTAKNIQEDLVRLLTPASTSSSVTIDSAITIPQLSLAQAPSSLAALLSYLSL
LSDPTNHGSFTIRTHDLTQYMRLDASALRAMNLSESGPSSGSSNRNTTLLGLLNKCKTAQ
GTRLLATWIKQPLVNLHEIRKRQDLVQMFVDNPDTRRTLQDDYMKYMPDLHRISKRFQKS
VATLEDVVRVYQVALKEYDENLSKYSEMVEQTLDLDELDNHHFVIKADYDSRLRELADRL
IEIRDGLDEEHKQVAEDLDVELDKKLHLENSQMYGYCLRLTKNEAKLIHNKRAYIELGTT
KSGTFFTTKTLKELSNEYQEVTESYSRTQSGLVKEVINIAATYTPVLESLDHVIAHLDLI
LSLAHVAVNAPEAYVRPTVLEKGSGNLILREARHPCLEVQDDISFIPNDVELVKGESEFQ
IITGPNMGGKSTFLLSCGVIALMAQIGSFVPCSEAQVPILDSILCRVGAGDSQLKGISTF
MGEMLDIATILRSATADSLIIIDELGRGTSTYDGFGLAWAISEHIASQIHSFCLFATHFH
ELTALDQQLPHVKNLHVVAHVAKTGDSKQDRDITLLYKVEPGVCDQSFGIHVAELANFPE
SVVKLAKKKAEELEEFNTDGDEDEPKFDKDTTDAGVKIVEDLMRTWASRIPDELDGEDVV
MPDSPLPELQLEELRKCVQEFQPQINANPWVQHLLASL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcatgtacggaaaagagaaagagtccaaccaagaaatagagcacgacccggga
ttctgctcattcttcacgaagttgccgtcgaagtcgccagagacagggaccatacggctg
ttttcacggccggagggtttctacacgactcatggacctgatgctcaatatgtggcaact
catgtcttccggacgaactctgtcatcaagtatctcggtggaggtggcaaagctggtctg
cccagtgttagcctgaaggagagcgtggcaaagacattcttgagggaggctctgacaact
aagcagctgagagtagagatatgggaacctgaacctggtcaagggaagaaacccacgaaa
ttcagacttacaaaagaggcatcacctggaaacctgcaggcggtagaggacctattgttt
gaaaactcagatatgatgtccgcacctattgtaatggccatcaagattgcctccagtgta
accgcaggatcaggcaaagccagaacgaaagccgtcggcgtagcttatgcggacgtgagc
atccgtgaactcggagtttcagagtttgtggacgacgacctcttctcgaatactgagtcc
ctgattatacaactaaacgtgaaagaagcactcatcaccacaggcaccgcatctgggaag
actgaacgtgacgtcgacctgaataaactcaaagccgtcttagagcgatgcggcgttgtt
gtgacagagcgcaagcctagtgaattcacggcgaagaatattcaggaagaccttgtcagg
cttttgactccagcgtccacctcgtcctcggtcaccatagactcggcgatcactatcccc
cagctatcgctcgcgcaagctccgtcgtctttggcggccttgctttcctacctgtccctt
ctgtctgatcccacgaaccacggctcgttcaccatccgaacgcatgacctgactcagtac
atgcgcctggacgctagtgctctccgtgcgatgaatctttcggagtcgggaccttctagt
ggatcatcaaatagaaatacgactcttcttggcttgctcaataaatgcaagacagcgcaa
gggactcggttactcgcgacgtggatcaagcagccattggtcaatttacatgaaatccga
aaacggcaagacctggtgcagatgttcgtcgacaaccctgacacccgacgcactctccaa
gatgactacatgaaatatatgcctgatctgcatcggataagcaagcggttccagaaatcg
gtagccactctggaggacgttgtccgagtttatcaagttgctttgaaggaatatgacgag
aatctctccaagtattcagaaatggtcgagcagacccttgatctcgatgagctggataac
caccacttcgtcatcaaagcggattatgacagccggcttcgggagctagcagataggtta
attgagatccgcgatggtctggatgaagaacataaacaagttgcagaagatcttgacgta
gaactcgacaagaagttacatcttgagaattctcagatgtatgggtactgcttgcgctta
accaaaaacgaggcgaaactcatccacaataaacgtgcatatatcgagcttggcacgacc
aagagtggcaccttcttcacaacgaagacgctcaaggagctctcaaatgagtatcaggaa
gttaccgaatcctactctaggacacagagcggtctggtcaaggaggtcattaacatagcc
gcaacatacacgcctgtcttggagtctctcgatcatgtcattgcccatctagacttgatc
ttgagtttggctcatgtggctgttaatgcgcctgaagcctatgtccgtcccaccgttcta
gagaaaggttccggcaatttaatcttgagagaggcccggcatccttgtctggaagttcaa
gacgacataagcttcatcccgaatgatgtcgagctagtcaagggcgagagcgaattccag
ataattaccgggcctaacatgggtgggaaatcaacgttcctgctgtcgtgcggtgtcatc
gccttgatggcgcagattggctccttcgtaccatgttcagaggcgcaggttcctattctc
gattcaatcctgtgccgagttggagctggagatagtcaactgaagggtatatctacattc
atgggtgaaatgctcgatatcgctactatcctcaggtcagccacagcggactcgctcata
atcatcgacgagcttggacgaggcacatccacctacgatggtttcggtctggcttgggca
atctcggagcacattgcgtcccagatccattctttctgtctcttcgcaacacatttccac
gaattaacggctcttgatcagcaattacctcacgtcaagaatctgcacgtcgtagcgcat
gtcgcgaagaccggcgactccaagcaagaccgcgatatcacattactatacaaagttgaa
cctggtgtttgtgatcagagtttcggtatacatgttgccgagcttgcgaacttccctgag
tcggttgtgaagcttgcaaaaaagaaagcagaggagctcgaagaattcaatacggatggc
gacgaggatgagccgaagttcgacaaggatacgacagacgccggtgtgaaaatcgtggag
gatcttatgcgtacctgggcatctcggatcccagacgaactggatggtgaagacgtcgtc
atgcccgatagtccccttccagaactgcaactggaggaacttagaaaatgcgtgcaggag
ttccagccgcagatcaatgcgaatccatgggtacagcatctgttagcatctctctga
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