Gloeophyllum trabeum: GLOTRDRAFT_117868
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Entry
GLOTRDRAFT_117868 CDS
T03130
Name
(RefSeq) WD40 repeat-like protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_117868
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
Other 90S particles
GLOTRDRAFT_117868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Vps41
WDR90_beta-prop_4th
WD40_like
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
WD40_RFWD3
Cytochrom_D1
Beta-prop_Nup120_160
DUF4698
Motif
Other DBs
NCBI-GeneID:
19300407
NCBI-ProteinID:
XP_007869839
JGI:
Glotr1_1_117868
UniProt:
S7RHD5
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MPDSFFATQKPRKRKRATTSDAPKKFARTANGKPKSSTSNSKSPSSSKAKPKPRATRDEE
LSSGTGSDVGIDDMDLRAEDVEEGSGDELENETPAEKRLRLAKLYLESVKEGLKRGEDEF
DAAEIDRELISERLKKDVLEEKGKVWLWVADEFDFSTLPTTTLRTRGHRLSVTSAVASED
ARFLFTAGKEGSIIKWDLPTGKKLAVFHKVRKEGKGKEKAGEVKGHTDEVLALALSTDGK
YLASGGKDRKVVVWDAEQGEWVKAFGGHKDLISGLTFRKNTQQLYSASFDRTLKLFDLSV
MGYVETLFGHQDCIQAVDALKGETAVSVGGRDRTVRFWKIVDQTQLVFRGGGRSKVREVL
EGGALEGLDEDGEEEGQRRKEREQRYVEGSVECVAMLDESTFVSGGDSGSICLWTTQKKK
PVFTQALAHGLHETHSETEGLIQTPRWVTSIAALRYSDLFASGSWEGSIRIWKLDQKLKS
FSLVGTVPAPGIINSLQIISPPKGAVDNIPWAKQEDVRLPNGNGVNGVKKSKASDVGSLL
LVAGVGQEMRFGRWLKLKNGGEGGEGAVNCALVIALHPRTLDS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgccggactcattcttcgccacccaaaagcccagaaagcgaaagcgcgcgacaacatcc
gacgcacccaaaaaattcgcgcgcaccgccaacggcaagcccaaatcatccacaagcaat
agcaagtccccttcctcctcaaaagctaagccaaaaccgcgggcgacgagggatgaggag
ctctcctccgggaccgggtcggatgtcgggatcgacgatatggacctgcgcgcggaggac
gtggaggaggggagcggggacgagctggagaacgagacgcccgcggagaagcggctgagg
ctggcgaagctgtacttggagagcgtgaaggaggggctgaagaggggcgaggacgagttt
gatgcggcggagatcgaccgcgagctgatcagcgagcggctgaagaaggacgtgctggag
gagaaggggaaagtgtggctgtgggttgcagatgagtttgatttcagcacgctgcctaca
actactctgcgcacgcgcggacaccgactctccgttacttccgctgtcgcgtctgaggac
gcccgattcctctttacagcgggaaaggagggatctatcattaaatgggatctgcccacg
ggcaaaaagctcgcggtgttccacaaggtacggaaagagggtaaggggaaggagaaagcg
ggtgaggtgaaggggcacacggacgaggtgctcgcgcttgcgcttagtacagacgggaag
tacctggctagcggggggaaagaccggaaagtggtcgtctgggacgccgagcagggggag
tgggtgaaggcgtttggcggacacaaggatctcatatccggtctaacgttccgaaagaac
acccagcaactctactctgcctccttcgaccgcacgttgaaactcttcgacctctccgtg
atgggctacgtcgagacgctcttcgggcaccaggactgcatccaggcggtggacgcgctg
aagggcgagacggcggtgagcgtcggcgggcgcgaccgcaccgtgcgcttctggaagatc
gtcgaccagacgcagctcgtcttccgcgggggagggcggagtaaggtccgggaggtgctc
gagggcggggcgctcgaggggctggacgaggacggggaggaggaggggcagaggaggaag
gagagggagcagaggtatgtggaggggagtgtggagtgcgtggcgatgctggatgagagc
acgtttgtgagtgggggggatagcgggtcgatctgcttgtggacgacccagaaaaagaag
ccagtgtttacgcaggcgctcgcgcatgggctgcacgagacgcactcggagacggagggg
ctgatacagacgccacggtgggtgacctccatcgcagctctgcgttattcggatttgttt
gcctcgggctcatgggagggctccattcgaatatggaagctcgaccagaagctcaagtcc
ttttcactggtggggaccgttcccgcaccgggcatcatcaactctttgcagatcatctcc
cccccgaagggtgccgtcgacaatattccctgggcgaaacaggaggatgtccgattacca
aacgggaatggggtcaacggggtgaagaagagtaaggcgagcgacgtgggcagcttgttg
ctcgtggcgggtgtcgggcaggagatgcggtttgggaggtggctgaagctgaagaacggg
ggagagggaggggagggcgcggttaattgcgcgttggttattgcgttgcatccgcggacg
ttggattcgtga
DBGET
integrated database retrieval system