Gloeophyllum trabeum: GLOTRDRAFT_118254
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Entry
GLOTRDRAFT_118254 CDS
T03130
Name
(RefSeq) condensin complex subunit SMC1
KO
K06636
structural maintenance of chromosome 1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04111
Cell cycle - yeast
gtr04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
GLOTRDRAFT_118254
04113 Meiosis - yeast
GLOTRDRAFT_118254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_118254
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
GLOTRDRAFT_118254
Meiosis-specific proteins
Cohesin complex and associated proteins
GLOTRDRAFT_118254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
SbcC_Walker_B
OmpH
ABC_tran
BRE1
Motif
Other DBs
NCBI-GeneID:
19300463
NCBI-ProteinID:
XP_007870794
JGI:
Glotr1_1_118254
UniProt:
S7R9G9
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MPLIRIEVCDFKSYRGHQTIGPFRNFTSVIGPNGAGKSNLMDAISFVLGVKSAQLRSSQL
KDLVYRGRRLARGGVDGQDASYISQSGQDEEGDEEGEGEGTAKTAWVLAVFEDSAKKEWR
FQRTISTTGASEYKLNGKVVTYAAYNAALQSHNILVKAKNFLVFQGDVEAVASQSPKELT
RLIEQISGSLELAGEYEKAKEAQERATENATFNFTKRRGIAGEIKQYKEQKSEADRFEAM
CQERDQLLLHRILWRLFHIEEGLEQHAREINAQSRTLEGLREEQREHDEELDAARAEQAK
ARSNVMQKEKRIKKAEKGLEAKKPDLVAVEGQIAHSARKLRNAQNIREQVAKEEHKQQEK
LTQLQKELAEVRKLADAAQEAQRRASQNNFSLSKESLQEYNRLKAEASILAVDERQALDT
LGRELKTVKRTLAQVKDKYEQLEQKKEKLTEESKSQNSKKSELEERISSLQSDLSAAKQE
LDNQQSERTRISQLETELNEKLAEVYQKILQAGMDQRESEREMKLKEVLTGLQRIFPGVR
GRVVDLCKPSARKYETAVSVILGRNIDAVVVDEEKTAIDCIEYMRNQRAGQATFIPLDTI
QVKPVNDKFRSFASKGARLAIDVIEYEPAVERAIHHACGNALVCDTMDVARYVCYEKGQE
VKAVTLEGTIIHKSGLITGGRSTHGTGKKWEEKDVQGLQRVRDSLLSQLRELAKNKPRGK
TDDTLIAEITRLENALTVAKDDLSACKLRLNGIRDELKHVTQELKKTTPELNKTQAQHDS
LEEKIIELSFVVNAAEDGVFAVFCRQIGVSNIREYEERQLKLTQEELEARNRYETQIARL
GHQSQFEEEQLKATRERLATLDATIRNEEVNLVRLEASKASILEELSEAESSIASLQEEL
QALNESLEEKTKVVDRVKRTASKATKALEQTLKEIASHNDEIEKLGLERSAIYRKCRLEN
VNLPLREGNLKNVPMEENLREEVAMDVDEEGGVERPKRVPDYGLEVDFEILDEDEREDGS
ADKGTELEDAISKLNEDIERMAPNLKAVDRLEDVESKLLETEKEADKSRKESKTARDQFN
DVKKRRCELFNKAYNHISECIDQVYKDLTKGKAAPMGGVAYLSLEDSEEPYLGGVKYHAM
PPMKRFRDMEQLSGGEKTVAALALLFAIHSYQPSPFFVLDEVDAALDNTNVAKVANYIRS
HASDTFQFIVISLKGSLYERGHSLVGIYRDQDVNSSRTLTLDLTQYDD
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgattcgcatcgaagtatgcgacttcaagtcatacaggggccatcaaaccatc
ggaccatttcgcaactttacctcagttatcgggcccaatggagccgggaaatccaacctt
atggacgccatctcatttgtactgggcgttaagagcgcccagctgcggagcagtcagcta
aaggacttggtgtaccgcgggaggaggctggctcgcggcggtgtggacggtcaggatgcg
tcctacatcagccaaagcggtcaggacgaagaaggggacgaggaaggagagggcgaaggc
accgcaaagaccgcctgggtcctcgctgtcttcgaggactctgcgaagaaggaatggcgg
tttcagcgaacgatatccacgaccggtgcctctgaatacaaactaaatggcaaagtcgtg
acctacgccgcctacaacgccgcgctgcagtcgcacaacatcctcgtcaaggcgaagaac
ttcctcgtcttccagggcgacgtcgaggccgtcgcgtcgcagtcgcctaaggagcttacg
cggctgatagagcagatcagcggatcgctcgagctcgcgggcgagtacgagaaagcgaag
gaggcgcaggagcgtgcaacggagaacgccacgttcaactttaccaagcgccgcggcatc
gcgggtgagatcaagcagtacaaggagcagaagtccgaggcagaccgtttcgaggcgatg
tgccaggagcgagatcaactcttgctgcaccgtatactgtggaggctgttccacatagag
gaaggcttggagcaacacgctcgggagatcaacgcgcagagccgtactctcgagggactg
cgggaggaacaacgagaacacgacgaagagctcgacgctgcccgggcggagcaggcgaag
gccagatccaacgtcatgcagaaagagaagaggatcaagaaggcggagaaggggctcgag
gctaaaaaaccggacctcgtggctgttgagggccagattgcgcattccgcaaggaaactg
aggaacgcgcagaatatccgagaacaggtcgcgaaggaagagcataagcagcaggagaag
ctcacccagctgcagaaggaattggctgaagtgaggaaattggctgatgctgcgcaagag
gcgcagagaagagcttcgcagaacaacttctcgttgagtaaggaaagtctccaagaatac
aatcggctgaaagccgaagcaagcattctggccgtggacgaacggcaggctttggataca
ttgggccgggaactcaagaccgtaaagcggacactggctcaggtgaaggacaagtacgaa
cagctagagcagaagaaagagaaattgaccgaggagtcaaagtcgcaaaattccaagaag
tcggagctggaagaaagaatttcgtcgctgcagagcgacttgtccgctgccaagcaggag
ctggacaaccagcagtcagagcggacgaggatcagtcaactagagacagaacttaacgag
aagctcgcagaagtatatcagaagattctgcaggcggggatggaccagcgtgagtccgag
cgggagatgaagctgaaggaagttcttactggtttgcagcggatcttcccaggcgtccgt
ggccgagttgtcgacttatgcaaaccctcggcacggaaatacgagaccgctgtgtccgtc
atcctcggtaggaacatcgatgctgtcgtcgtcgacgaagagaagacggccatcgattgc
atcgagtatatgcgcaaccaacgagccggccaggcgacattcatcccactcgacacaatc
caggtcaagccagtcaatgataaattccgctccttcgccagcaaaggagccaggctcgcc
attgatgtaatcgagtacgaacccgcggtggaaagggcaatccatcacgcttgcgggaat
gccttagtatgtgatacaatggacgtggctcgatacgtgtgttacgagaagggtcaagag
gtcaaagcggtgactttggaaggtactatcatccataagagcgggttaattaccggtggc
cgcagtacacatggtactgggaaaaagtgggaggaaaaggatgtgcaagggttgcagcgt
gtccgtgactcgctcctatcccagttgcgcgaattggccaagaataagcccagaggtaaa
accgacgacactttgatagctgagatcacaaggctggagaatgccctcactgtcgccaag
gacgacctgagtgcctgcaagctgcgactaaacggcatccgggacgagctgaaacacgtt
acacaagagctgaagaagaccactcctgaattaaacaagactcaagctcagcatgattcc
ttggaagagaaaatcatagagctgtcgttcgtcgtcaatgcagcggaggacggggttttt
gcagtgttctgccgtcaaatcggagtctccaacattagagaatacgaagaacgacagctc
aagctcacacaggaggaacttgaggcccgtaaccggtacgagacccaaatagcgagatta
ggccatcagtctcagttcgaggaagagcaattgaaggcgacaagggaaaggcttgctacc
ttggatgctaccattcgcaacgaagaggtcaacttggtcaggcttgaggcttcgaaggca
tcaatactggaggagcttagcgaagccgagtctagcatagcgtcactccaggaagaacta
caagctctgaacgaatcattggaggagaaaacgaaggttgtggaccgagtgaaacggaca
gcttcgaaggccacgaaggctctggagcagaccctcaaagaaattgcatctcacaatgat
gagatcgagaaattaggattggaacgatcggcgatataccgcaagtgtcgcctcgagaac
gtgaacttgcccctgcgggagggaaacctcaaaaatgtacctatggaggaaaatttgcgg
gaagaagtggctatggatgtcgacgaggaaggcggtgtggaacgacctaagcgagtgcct
gactacggtcttgaagttgacttcgaaatccttgacgaagatgagcgagaagatgggtct
gccgacaaaggcacagaattggaggacgcgatatccaagctcaacgaggacattgaacgg
atggcccccaacttgaaggctgtggacaggctggaagacgttgagtcgaagttgctcgag
acagagaaggaagcggataagtcaagaaaggagtccaagacagctcgcgatcagttcaac
gacgtcaagaagcgacgctgtgaattattcaacaaagcctacaaccacatctccgaatgc
attgatcaagtttacaaggacttgaccaagggaaaagcagctcccatgggtggggtggca
tatctgagtttggaagatagcgaggagccctatctaggcggcgtcaagtatcacgctatg
cctcccatgaaacgtttccgagacatggagcagttgtctggaggtgaaaagaccgtagct
gccttggctcttctcttcgcaattcatagttatcaaccttctcctttcttcgtcctcgat
gaagtcgacgctgcattggacaacacgaatgttgccaaagtcgccaactatatccgttct
catgcttccgacactttccagtttatcgtgatcagtctcaagggatccttatacgagagg
ggccattctttggtcggaatataccgggatcaggatgtgaacagttctcgcactctgacg
ttagacttgacgcaatacgatgactga
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