Gloeophyllum trabeum: GLOTRDRAFT_118437
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Entry
GLOTRDRAFT_118437 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03013
Nucleocytoplasmic transport
gtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GLOTRDRAFT_118437
09122 Translation
03013 Nucleocytoplasmic transport
GLOTRDRAFT_118437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_118437
03041 Spliceosome [BR:
gtr03041
]
GLOTRDRAFT_118437
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
GLOTRDRAFT_118437
Spliceosome [BR:
gtr03041
]
Complex C
Other components
EJC/TREX
GLOTRDRAFT_118437
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GLOTRDRAFT_118437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
DUF8168_C
Tuberin
IDO
Motif
Other DBs
NCBI-GeneID:
19300489
NCBI-ProteinID:
XP_007860470
JGI:
Glotr1_1_118437
UniProt:
S7QKP9
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MTSLESAMKTLMSSISSRSIPKEELDALVQQALEETGGEDGRETRKARWEFRLKEEILKL
AATEGEALKNPNTDYYDRLRDRLDLVLTFTELDACEQTFPVTVLQDLLDTQTIRSCSRIF
SWIEERADRLTKDMVPQKAKALILLRALNDLLRRLSKMGNTTVFCGRILTFLSGIFPLGE
RSGVNLRGDYGPMWDGPGLKKDQQPETKEEEREGVAPPAEDKMQVDEPEARKQEEQSVDF
YSLFWSLQRPFSRPPLFVNPETLPSFKSAVEKVLPVIKEATSKERAMMGSRSSDANGASR
SLKRKRVPEPGEETSKVSREYFFAKYLTSPELLELEIADTHFRRQFLFQLLILLHYLLSF
TRSAKSSWMSLKNRSLQLDFTLDEENAKWVQTTIDTVTRDFLPSTFPNGVLFRDTVKTIL
EREKNWVDWKNKLCPVFDKEPWSALVDGRKVGLEEFTKPMREKMREEPPEWEHKLGSAPL
TEIWAMGYRDLRDLERSPDPGSIDTYASKIKMEDRRIEMRRQTLARAAERLAQARAKANT
PVPPVKDANGAAPAVPAQEDAGRSTPGNAASPPLHHPLPPKPGTTSMESPAPAAPAIVAP
VPNPPAVPPVRVDVPASPAPDPIPINDDQINKFEENKHRWAWLCLRIAREEYLDQFGKIG
TGDVLALEREIKKALAEKANPKPQKDDAEQHAPTGTTGEQDRGTSPSASNLKVPPAEGDV
QMSGTPEVEGDVKMEER
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgctagaaagcgctatgaagacgcttatgagctcgatttcatcccgttcgatt
cctaaggaggaacttgacgcgctagtgcagcaagcattggaggagacaggcggggaggac
gggcgcgagacacggaaagcgcggtgggagttccggttgaaggaggagatactcaaactc
gcagcgacagaaggagaggctttgaagaatccgaataccgactattatgaccgactacgg
gaccgtttggacttggtgctgaccttcaccgagctagatgcttgtgaacagacattccca
gtaacagtcctgcaagaccttctggacacgcagacaatccgctcgtgctcccgaatcttc
tcatggatcgaagagcgcgcagaccgacttacaaaggacatggttccccagaaagccaaa
gcactcatcctcctgcgcgctctgaatgacctcctgcgacgactgtcgaaaatggggaac
acgacagtcttctgtggccgcatcctgacgtttctgagcgggatattccccttgggcgag
cggagtggcgtcaatctccggggtgattatggtcccatgtgggacggcccggggttgaag
aaggatcagcagcccgagacaaaggaagaggagagggaaggggtggcgccgcctgcggag
gataagatgcaggtggatgagccggaggcgcggaagcaggaggagcaaagtgttgacttc
tactcgttattctggtcgctgcaacgcccgttctcccgccctcctttgttcgtgaacccg
gagacccttccgtcgttcaagagtgcggtagagaaggtgcttcctgtgatcaaggaggcg
accagcaaggagcgggctatgatgggcagcaggtcgagcgacgcgaacggggcctctagg
tccctgaaacggaaacgggtgccggagccgggtgaagagactagcaaggtttcgagggaa
tacttcttcgccaagtacctgacgagtcctgagttgctcgagctcgagattgcagacaca
catttccgtcggcaattcctgttccaactgctaatcctactgcactacctattatccttt
accagatccgccaagtcatcgtggatgtccctcaagaaccgctccctccaactggacttc
acacttgacgaggagaacgcgaaatgggtgcagacgactatcgacacggtcacgcgcgac
ttcctcccctccaccttcccgaacggcgtcctcttccgcgataccgtcaagacgatactc
gagcgcgagaagaactgggtcgactggaagaacaagctgtgccccgtgttcgacaaagag
ccttggtcggcactggtggacggaaggaaggtgggtttggaggagttcacgaagccgatg
agggagaagatgagggaggaaccgccggaatgggaacacaaactggggtcggcgccgctg
acggagatttgggcgatgggataccgagacctcagagatttagagcgaagcccggacccc
ggctccatcgacacgtacgccagcaagatcaagatggaagatagacgcatcgagatgcgt
aggcagacgctggcgcgggccgccgaacgactcgcgcaggctagggccaaagcgaatacg
ccagtacctccagtgaaagacgcgaacggggctgcgcccgctgtgccagcgcaggaagat
gcgggacggtcaacgccgggcaatgctgccagtccgccgcttcaccacccgttgcctccc
aaaccgggcactacgtccatggaatctcccgcccccgctgcgccggcgattgtcgcgccc
gttccgaacccaccggctgtgccgcccgtaagggtggacgtacctgcatctcctgcaccg
gatcctattcccattaatgatgaccagatcaataagttcgaggagaacaaacatcgctgg
gcttggctctgtctgcgcatcgcgcgcgaagagtaccttgaccagtttgggaagattggg
acgggggatgtcctggctctcgaacgggaaatcaagaaggcactggcggagaaggcgaac
cccaagcctcagaaagatgatgccgaacagcatgcacctactgggacgaccggggaacag
gaccgcggcacgagcccatctgcgtccaatctgaaggttcccccagctgagggggacgtc
cagatgagtggcactccggaggttgagggtgacgttaagatggaggagcggtag
DBGET
integrated database retrieval system
