Gloeophyllum trabeum: GLOTRDRAFT_119173
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Entry
GLOTRDRAFT_119173 CDS
T03130
Name
(RefSeq) Cullin-domain-containing protein
KO
K10609
cullin 4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03420
Nucleotide excision repair
gtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GLOTRDRAFT_119173
09124 Replication and repair
03420 Nucleotide excision repair
GLOTRDRAFT_119173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gtr04121
]
GLOTRDRAFT_119173
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_119173
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gtr04147
]
GLOTRDRAFT_119173
Ubiquitin system [BR:
gtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
GLOTRDRAFT_119173
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GLOTRDRAFT_119173
TCR (transcription coupled repair) factors
Cul4-CSA complex
GLOTRDRAFT_119173
Exosome [BR:
gtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GLOTRDRAFT_119173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF515
Motif
Other DBs
NCBI-GeneID:
19300539
NCBI-ProteinID:
XP_007861495
JGI:
Glotr1_1_119173
UniProt:
S7S1G6
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSNNAKRVRLLRELANGLFTLRIFANPEIKWRLNAAIEKWLAWERHHRAAHELRPRFQEL
IGHLYVYGQYSPVLEVPYLEFTEAFYTAESQALYETCDSARDFAKECKIRIQEEEQRARE
VLSPKSWDEVRKTTERQLLNSRLKWLASNALPAIMDAKALDELADLYDLFSRAAGHKVLA
NAFKEYVQNNVKAIVKDEARDEEMVERLLECKSFAETAISTAFVDIVRDEDEPRASTSDT
PPAKQPHKEFGYALLDAFQGGFKARRKKPAEMIAKYLDKAMRRGQKGASDEEFDRALDAA
LSLYRFTDDKDVFRTFYRRGLAKRLLLQRSASDDFEKAVLKKLKEQFDPEFETGDDMFKD
LALSRDMLAEFHQKLAEDDPAHKLSVTVLQQSVWPFTPNATVDLPTFMQDQLNRFTVFYK
NKHQGRKLEWDHNLGTANLKARFKAGSKDLSVSLHQAVILLLFNDTDEISFTDIQASVHM
EDGTLRRTLQSLACGKKRVLKKRPAGPDVNDGDVFLYNAEFTDSRPRVHINTIQVKETPE
EAKRTQTAIEGDRKHILDAAIVRIMKAKKQMRYEQIKNDTIEAVKKHFVPEVSVIKQRIQ
QLTEQEYMRRDEDDMNLYIYVA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataatgcgaagcgcgtccgactacttagggagctggctaatgggctcttcacc
ttgcggatcttcgcgaaccccgagataaagtggcgtctgaatgccgccatagagaagtgg
ctcgcttgggaacgtcatcacagagctgctcatgagctccggcctcgcttccaagagctc
atcggtcatctctatgtgtacgggcagtattctccggtcttggaggtgccgtatctggaa
ttcacggaggcgttctacaccgccgaatcccaggcgctctatgaaacgtgcgatagtgcg
agagacttcgccaaagaatgcaagatccgtatccaggaggaggagcaacgagcgagggag
gtcctgtctcctaaaagctgggacgaggtgagaaagacgacggaaaggcagttgttgaac
agccgattgaaatggttggcgagtaacgccttgcctgcaatcatggatgccaaggctctg
gacgaactggcggatctctacgacttgttctcacgagccgccggtcacaaggtcctggct
aatgccttcaaggagtacgtccagaacaatgtcaaagccatcgtgaaggacgaagcccgc
gacgaggaaatggtcgagcgcttgctcgaatgcaagagcttcgccgaaacagcgatatca
accgcattcgttgacatcgtgcgcgacgaggacgagccccgcgcgtccacgtcggatacg
ccccctgcgaagcaaccacacaaggagtttggctacgctctgctcgacgcattccagggt
ggcttcaaggcacggcggaagaagcccgcggagatgatcgctaagtatctcgacaaggcg
atgcggcggggccagaaaggcgcgagcgacgaggagttcgaccgcgctctggatgcggcg
ctgtcgctgtataggttcaccgatgataaggatgtatttaggacgttctatcgcaggggc
ttggcgaagcggctcctgttgcagaggagtgcatcggatgatttcgagaaggcagtgttg
aagaagttgaaagaacagttcgaccctgaattcgagaccggagatgacatgttcaaggac
ttggctctttcgagggacatgctagcagagttccaccagaaactggcggaagacgaccct
gcgcataagctgtctgtaaccgttttgcagcagagtgtctggcctttcactcccaacgcc
acggttgacctgccaactttcatgcaagatcagttgaacagatttaccgtgttctacaag
aacaagcaccagggccggaaactagaatgggaccataatttgggtacggcgaacttaaag
gcgcggttcaaggctggctcgaaggatctatctgtcagcctgcatcaggctgtgattctg
ctactcttcaatgatacggatgagatctccttcacggatatacaggcgtctgtacatatg
gaggacggaacgttgcgcagaacactccagagtcttgcatgcggcaagaaaagggttctg
aagaagaggccggccgggcctgacgtcaacgatggggatgttttcctttacaatgcagaa
ttcaccgactccagacctagggtccatatcaacactatacaagtcaaagagacgcctgag
gaagccaaacgcacgcagacggcaatcgagggagaccggaagcacatactggatgcagcc
attgttcgtatcatgaaggccaagaaacaaatgcgctacgaacagatcaagaatgatacg
atagaggcggtcaagaaacacttcgtcccggaagtcagcgttatcaaacagcgcatccag
cagctgacggagcaagaatacatgaggcgagacgaggatgatatgaatctgtatatttac
gttgcatga
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