Gloeophyllum trabeum: GLOTRDRAFT_123015
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Entry
GLOTRDRAFT_123015 CDS
T03130
Name
(RefSeq) SNF5-domain-containing protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03082
ATP-dependent chromatin remodeling
gtr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GLOTRDRAFT_123015
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GLOTRDRAFT_123015
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gtr01009
]
GLOTRDRAFT_123015
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_123015
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_123015
Protein phosphatases and associated proteins [BR:
gtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GLOTRDRAFT_123015
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GLOTRDRAFT_123015
SWI/SNF complex
GLOTRDRAFT_123015
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
GLOTRDRAFT_123015
PBAF complex
GLOTRDRAFT_123015
SWI/SNF complex
GLOTRDRAFT_123015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
19300905
NCBI-ProteinID:
XP_007869744
JGI:
Glotr1_1_123015
UniProt:
S7RH06
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MNPNAAPNAFSYPGAGGINPALLASMHGGGGAAPAPAPAPAVQQPGNKFPYGGGLGGISL
NPQMFQPGAGPAAGLMSFTPQQYQQLAQMKAMGMRAPGNVNMNPNMNAMQPHQQQQQSFP
PGFAMGQPQPHDAQPPFFNERRPSSSASHSSAHMPQNMNPNMSMSMPPPASVPPRPPTAA
PPSRPPTQSPYHGVKRKLPGAGAESPRLGMGHPGQGASVNGAPQTPRVGSAGPGPGTPAN
ASGGVGMGMNMNMNMVPGAGGVAGGLPGEIKRQPSGAPDGMFAQKNASGPAGTSAPAPRP
AANPPPALPRPVSLNPATTRVTVVPLAGSDATIPALSQAEIEKVKEWMQVDKEYEERLRG
MKGRMELEVREGWVNGVREVGGVNGSVGRAAWWEKDGAPGAGGRRREKFGITYPKSGKEG
RRKVGRREGMKLPRKIDPRDADRPEQLVPIRLEFDVEHHKMRDTFVWNLNDPVVTPELFA
QSVVDDYALPQAYHGVITKSIQEQLSDYQAHAAGAEAAEALRGRLDGEEAAWWESWRKRL
RTRGGFVRKGKRKEEGEGEGDVGRAYKLDELEVGEEGAREEMRIVIKLDIIVGSIKLDDQ
IEWDLNNENASPEHFAEVYGKELGLAGEFITAIAHSIREQIQTFQKSLFLVGHPSDGSAV
QDDDLRMTFLPPLASAARALDQVPAFTPTLNYLDDSEIEKSEREREKEATRRRKRNTRGR
RGVALPDREPLRTYRTPALGFPEVDAATLAAAAMANVPTRRAAAAAASLTIANMVASENG
TIVATPQMPVSLLPSAAGREAKEKKARGLFKPPELPPAAFRPRAKVKAPTESTAMDTSLL
PPPLENDPPVSTAGSGPPDSRMSVKPGKVKTARELEREAKEKEYADGQHPNFIDGVWHCS
NCGCPESIAVGRRKGPLGDKTQCGQCGKFWHRHRRPRPVDYNSSAEYHRNLMEEAERAKV
MARKKGGAAALRAMSTATEQDPPPSAGPSGSSSRPSRPNSVARTGGRAQLWVEVPPPQTP
VTAGEGEDDSKDAISPISSGSSSASESPLAHRIRPNGVNHSNQSSTPAPRPTSTADAQGS
VVSSQPPSAHPKPPSSNHNNVSTEPPEWLSAAMQAMRERYPQDRFETILKKLNPNASPEW
RIKCLDCPGKLYTPGPGETLSNYEVHLKNRQHRQRVTNRVNESSTS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccaacgccgcccccaacgccttctcctaccccggcgccggcggcattaacccc
gccctcctcgcatccatgcacggcggtggcggcgccgcccccgcccccgcccccgccccc
gccgtccagcagccgggcaacaagttcccctacggtggcggcctcggcggcatcagcctc
aacccccagatgttccagcccggcgccggccccgccgcgggcctcatgagcttcacgccc
cagcagtaccagcagctcgcccagatgaaggccatgggcatgcgcgcgccgggcaacgtc
aacatgaacccgaacatgaacgcgatgcagccccaccagcagcagcagcagtcgttcccg
ccgggcttcgcgatgggccagccgcagccgcacgacgcccagcccccgttcttcaacgag
cgcaggccgtcctcgagcgcgtcgcactcgtccgcgcacatgccgcagaatatgaacccc
aacatgtccatgtccatgcccccgcccgcctccgtgcccccgcgcccgccgaccgccgcc
ccgccctcgcgcccgcccacgcagtcgccgtaccacggcgtcaagcgcaagctccccggc
gcgggcgcggagagcccgcgcctcgggatggggcacccggggcaaggcgcgagcgtgaat
ggcgcgccgcagacgccgcgcgtggggtcggccggccctggtcctggtacgcctgcgaat
gcgagtggtggggtgggcatgggcatgaatatgaatatgaatatggtgccgggtgctggt
ggcgtagcgggagggctccctggagagattaagcgccagccctcgggcgcgcccgacggg
atgttcgcgcagaagaacgcgtccgggcccgcagggacgagcgcccccgcgccgcgcccc
gcagcgaacccgccgcccgcgctcccgcgccccgtctcgctcaaccccgcgaccacgcgc
gtgaccgtcgtccccctcgccgggtccgacgccaccatccccgcgctctcccaagccgaa
atcgagaaagtcaaggagtggatgcaggtggataaggagtatgaggaacggctgcgcggg
atgaagggaaggatggagctggaggtgcgcgaggggtgggtgaatggcgtgagggaggtg
ggcggtgtgaatgggagtgtgggccgggcggcgtggtgggagaaggatggtgcgcccggg
gcgggcgggaggagaagggagaagtttgggattacgtaccccaagagtgggaaggagggg
cggaggaaggtcgggaggcgggaggggatgaagctgccgcgcaagatcgacccgcgagac
gcggaccgcccggagcagctcgtgcccatccgcctcgagttcgacgtcgagcaccacaaa
atgcgggacacgttcgtctggaacctcaacgacccggtcgtgaccccggagctcttcgcg
cagtccgtcgtggacgactatgccctcccgcaggcgtaccacggcgtcatcaccaagtcc
atccaggaacagctgagcgactaccaggcgcacgccgccggcgcagaggcggcggaggcg
ctgcgcggccgcctggacggagaggaggccgcgtggtgggagagctggcggaagcgcctg
cgcactagggggggattcgtgaggaagggcaagaggaaggaggagggcgagggcgagggg
gatgtgggacgggcgtataaactggacgagctggaggtgggggaggagggggccagggag
gagatgaggattgttatcaagctggatattattgtggggagtatcaagctcgatgaccag
attgagtgggatctcaataatgagaatgcgtcccctgagcactttgcggaggtgtatggg
aaggagctggggcttgctggggagttcatcacggccatcgcccattccattcgtgaacaa
attcagacattccagaaatcgctcttcctcgtcggccacccctccgacggctccgccgtg
caggacgacgacctgcgcatgaccttcctcccgccgctcgcctccgccgcgcgcgcgctc
gaccaagtgcccgccttcacgcccacgctcaactacctcgacgacagcgagatcgagaag
agcgagcgcgagcgcgagaaggaggcgacgcgccggcgcaagcgcaacacgcgcgggcgg
cgcggcgtcgcgctgcccgaccgcgagccgctgcgcacgtaccgcacgcccgcgctcggg
ttccccgaggtcgacgcggcgacgctcgcggccgcggcgatggcgaacgtgccgacgagg
cgcgcggccgcggccgcggcgtcgctgacgattgcgaatatggtcgcgtcggagaacggg
acgatcgtcgcgacgccgcagatgccggttagtttgctgccgtcggcggcggggagggag
gcgaaggagaagaaggcaaggggcttgttcaagccgcccgagctgccgccggctgcgttc
agaccacgcgcgaaggtgaaggcgcccacggagtcgacggcgatggatacgtcgctcctg
ccgccgccattggagaatgatccgccggtatctactgcgggctcgggcccgccggatagc
aggatgtcggtgaagcctgggaaggtaaagactgcccgcgagctggagagggaggcgaag
gagaaggagtatgcggacgggcagcatcccaatttcattgatggcgtctggcattgctcg
aactgcggctgtcctgagagtatcgctgtcggcaggaggaaggggccgctgggtgacaag
acgcagtgcgggcagtgtggtaaattctggcaccggcatagacgaccccggccggtcgat
tacaatagcagcgcggagtaccatcgcaacctgatggaagaggcggagcgagccaaagtg
atggcacgcaagaaaggaggagcggcagcactacgcgcgatgagtaccgccactgagcaa
gatccaccgcctagcgccgggccctctggttccagctcgcgaccttccaggccgaactcc
gtcgcgagaacgggtggtcgagcgcagttgtgggtagaagtgccccctccgcagacgcct
gttactgccggggaaggggaggatgacagcaaggacgcgatatcgccgatatcgagcgga
agctcgagtgcatcggagtcgccgctcgctcataggatccggcccaatggagtcaatcat
tccaaccaatcgtcaacacccgcgcccagaccgacgtcgactgcagatgcgcagggttct
gtcgtctcgtctcaaccgccctcggcgcacccgaagcctccctcttcaaaccataataat
gtttcgacggaaccgcctgagtggctctccgctgccatgcaagcgatgcgggagcgatat
cctcaggatcgcttcgagactatcctcaaaaaactgaatccaaatgcgtcaccggaatgg
cgcatcaagtgtctggactgtccgggcaagctgtatacccctggcccgggtgaaaccctc
tcaaattacgaagtccatctgaagaatagacagcatcgacaacgggtgactaaccgcgtg
aacgagtcgtctacatcatag
DBGET
integrated database retrieval system