Gloeophyllum trabeum: GLOTRDRAFT_124154
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Entry
GLOTRDRAFT_124154 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K17919
sorting nexin-4
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GLOTRDRAFT_124154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_124154
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gtr04990
]
GLOTRDRAFT_124154
Membrane trafficking [BR:
gtr04131
]
SNARE
SNARE associated proteins
Others
GLOTRDRAFT_124154
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
GLOTRDRAFT_124154
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
GLOTRDRAFT_124154
Domain-containing proteins not elsewhere classified [BR:
gtr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
GLOTRDRAFT_124154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
CC4_CEP85
BAR_3
Motif
Other DBs
NCBI-GeneID:
19301054
NCBI-ProteinID:
XP_007861591
JGI:
Glotr1_1_124154
UniProt:
S7S1U4
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MLGDDEDVFDSVTWESPSAPAYGTEEPTAPVGPGFKQSTSESEDGRGPHDPKWEGYLITS
VKDPVKELAETKDAYVSYLVFAHTNLPIFSTPNPSSRRRFQDFVFLRENLVKDFPACVVP
PLPDKHRLEYITGDRFSPEFIERRRLDLHRFLQRIARHPTLQRSTLVRAFFESTEWHVTM
HQHVAHPPVPETSTGIIDSLSDTLLNAFSRVRKPDERFLAMRERVDKFEEGLNATERMWT
RIRNRTNAERAGDPDTGEDLTADYHDMAVAVQGLGFLESGITDPLNHFSNTLLEFSALQR
HLTQTTTDPFLVHLHSLLAYSHANRAVLKLRDQKQMDFEELSDYLSGVTAERDRLAAVIS
GHAGSTGLGLSAYIRDKVDALRGADDDRSRVEKMRKLDTKIKELQDAVTTAHETSDAFSD
ETLREQNIFQYAKEAEMKEMLGNLADGQIEFYRAAMEEWDRIIPIIQRIRVDV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctaggcgacgacgaggatgtgttcgatagtgtcacttgggagtcgccgtcggcccca
gcatatggtacagaggagcctaccgcgcccgtagggcccggattcaaacagagtacctca
gaaagtgaggatggccgtggacctcacgatcctaaatgggaggggtacttgatcacctcc
gtcaaggatcccgtgaaggagttggcagagaccaaagacgcttatgtgtcctaccttgtt
tttgcacataccaaccttccgatattctcgactcccaacccgtcgtctcgacggcgcttt
caagactttgtcttcttgcgggagaacttggtgaaagactttccagcatgtgtggttcct
ccgctgcccgacaagcatcgcctagaatatattacaggcgaccgtttcagccctgagttt
atcgagcgtcggcggctcgatctacatcgcttcttgcagcgtatcgcacgacatcccact
ctgcagcgcagtactcttgtgcgcgcattcttcgagtcaacggaatggcatgtcaccatg
catcaacatgttgcacatcccccagtgcccgaaacatcgacaggaataattgacagcctc
tcagataccttgctcaatgcgttctcccgtgtgcgcaagcctgacgagcgatttctcgcc
atgcgggaaagggtcgacaaattcgaagagggcttgaacgctaccgagaggatgtggaca
cgcatcaggaatagaacaaacgctgaaagagctggcgatccggacactggtgaagatttg
accgcggactatcacgacatggctgtcgccgttcaaggcctgggtttcttggaatccggg
attaccgatcctctcaatcatttttccaacacgctgctggagttttcggctctacagcgc
catttgactcaaacgaccaccgatccattcctcgtccatctgcactccctcctcgcatac
tcccacgccaatcgggctgttctcaagcttcgtgaccagaaacagatggatttcgaagaa
ctctctgactatctgtctggcgtaacggctgagcgggaccgactagcagcagtcatcagt
ggtcatgccggaagtactggtctgggtcttagtgcttacattcgagataaggtggacgct
ctccgaggggcagacgacgacaggagtagagttgagaagatgcgtaagctggatacaaag
attaaggagttgcaagatgccgtcacgaccgcacacgagacgtccgatgctttcagcgac
gagacgttacgggagcagaatatattccagtacgccaaggaggccgagatgaaggagatg
ttgggcaatctagcggacggacaaattgaattctatcgagcggctatggaggaatgggat
aggatcattcctataattcagcgtatacgagtggatgtctaa
DBGET
integrated database retrieval system
