Gloeophyllum trabeum: GLOTRDRAFT_127906
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Entry
GLOTRDRAFT_127906 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GLOTRDRAFT_127906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_127906
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
GLOTRDRAFT_127906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
19301619
NCBI-ProteinID:
XP_007864631
JGI:
Glotr1_1_127906
UniProt:
S7RW80
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MPGFQSVVAGTKRKSDGPDLSGAPGKRPALDDNAGSTGAGTCWMVQWRVPQQKKHKTWDG
DAVLVVNRGGANLVNLEGKLIASGKVNESVEEGKEFHLGGKDLEIDHPIPWSEYLSGACF
GAGTSSSTAPSTCHMLPKQSKPFKPVALNPDHVRSTSRTAGIAATPKKGIQLEPVDLMAD
NRIYGSQKDSYWTANWRKHQQKKHKTWDGDAFVMQKGDKLTLVSETGKILGSKKCTDYPL
YSGYHTFVGSREVELDAEIPLSQMPTITGQVEEPVIDPEYDPAAYSSQATTPLKSTSNAL
SSPTAPLNSASTSKKYVAPANFYAKVPQKPKKYGPLHDPENEGSVVMKAPTPEHIARFNK
KNSPVVPVVIDPILSRRLRPHQKEGVKFMYECVMGLRKHEGQGCILADEMGLGKTLQTIA
LVWTLLKQNPYAGVGPVVGKVLIVCPVSLVNNWKMEFHKWLGKDRVGVFIGDKDKNQIKQ
FINSKIHQVLVIGYEKLRSVIEALAYCHPPIGLIICDEGHRLKSSENKTSKMFQALKTPR
RIILSGTPVQNDLGEFHSMADFCNPGLLDDYKTFRRVYEQPILKSRAPDCTSKEAELGQA
RQAQLTTISKSFVLRREASILGNYLPPKYEYVVFVTPTSLQLSMFSKVLNVDKLDNLIGG
STAESLALINILTKLSNSPVLLKAVADKAKMSPGQGGKMIKASSIQEALKLLPDRIVPED
VSMSGKLTALANLLQALRESTSEKCIIVSHYTSTLNVVEAFCKKKRYTYHRLDGQTPPTK
RQEYVNDFNKSSQATRFLFLLSAKAGGVGLNLIGASRLVLIDSDWNPSHDLQAMARIHRD
GQKHPVFIYRFLTAGTIDEKIYQRQVTKLGLADSLMGSSKAESKSDSFSHKELRDIFRIH
PNTGCQTHDILECPCDPTNGRKPVEHSSPSICLDEDDEDMGDVTSGFVVASQLKSEDINK
MDKAYLQKQKAALATLGEWAHINCLQKSSKINIHDRILRDLVYSPEDEVEDEEPTEPKSR
LDALLEAADFDNIAALDEPKMSLSPRDIPGGSISFLFERGSKAPVEEGEEDQ
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttttcaaagcgtggtagcagggacgaaacggaaatccgatggaccagacttg
agcggagcaccggggaagaggccagcgctagatgacaacgcgggttcgacaggcgccggg
acgtgctggatggtacaatggagggttcctcagcagaagaagcataagacatgggatgga
gacgctgttctggtagtaaaccggggtggggctaacttggttaatctggaaggcaaacta
atagcgagcggtaaggtcaacgaatctgtggaagaagggaaagaattccatctgggtggc
aaagacctcgagatagatcatcctatcccatggtcggaatatctttccggtgcttgcttc
ggtgcaggcacatcatcaagcactgcaccgtctacctgccatatgctacctaaacagtcc
aaacctttcaagcccgtcgcgttgaatccggatcatgtgaggtcgacatccagaactgca
ggtattgcggccaccccaaagaaaggcattcaattggagccggtggacttgatggcagac
aaccgcatatacgggagtcagaaagattcttactggacagcgaactggagaaagcatcag
cagaaaaagcataaaacatgggatggagatgcattcgtcatgcagaagggtgacaagctg
accctagtatctgaaaccggcaaaatattggggagtaagaagtgcaccgactatcctcta
tacagcggctaccacacgttcgtcggctccagagaagtcgagttggatgcagaaatcccc
ttatcgcagatgcctactattacaggccaagtcgaggaacctgtcatcgatcctgagtat
gatcccgcggcgtactctagccaagctactacacctctcaagagtacatcaaacgccctc
agctctcccactgccccgctcaattctgcctcgacgagcaagaagtacgttgcacccgct
aacttctacgccaaggtgcctcaaaaaccaaagaaatatggtcctttgcatgaccccgaa
aatgaaggctctgtagtaatgaaagctcctacgccggagcacatagctagattcaacaaa
aagaactcccctgtagttcctgtcgtgatagatcctatcctttcccggcgtctccgcccg
catcagaaagaaggtgtcaagttcatgtatgaatgcgttatgggtttacggaagcacgaa
ggtcaaggctgcatccttgcggatgagatgggtctgggcaagacacttcagacaatagct
ctcgtgtggacgcttctcaagcagaatccgtacgctggcgtaggtcctgtggtgggcaaa
gtgctcattgtatgtccagtttccttggtaaacaactggaaaatggagttccataaatgg
ctggggaaagaccgcgtcggggtcttcattggcgacaaggacaagaaccagatcaagcag
tttatcaactccaagattcaccaagtactggtcatcggctatgagaagttgcgatcagtc
atcgaagccttggcgtattgccacccgcccatcggcttgatcatatgcgacgaaggccat
agactgaaatccagtgagaacaaaacttcaaagatgttccaagccctgaagactcccaga
agaattatactctcgggaacgcctgtgcagaatgatctcggggagttccattcgatggcc
gacttctgcaaccctgggctcctggacgattataaaaccttccgacgggtatatgagcaa
cccatcctcaagagccgtgcacccgactgcacatcgaaggaggctgaactggggcaggct
cgtcaagcacagttgacaacgatcagcaaaagctttgtcctgcgaagagaagccagtatc
ctgggcaactatctgcctcccaagtatgaatatgtggtgttcgtgacgcccacgtctctc
cagttgtcgatgttctcgaaggtcctgaacgtggataagcttgataacctcatcggcggc
tcgacagcagagtcgctcgctctcatcaacattctgaccaagctgagcaacagccccgtg
ctcctcaaagcggttgctgataaggcgaagatgtcgcccggacaagggggcaagatgatc
aaagcgagctctatccaagaagctctcaagctcttaccagataggattgtaccagaggat
gtttctatgagtgggaaactgacagccctggccaatctgcttcaggcattacgagagtcg
acgtctgagaaatgcattattgtatcccactacacgtcgacattgaatgtagtcgaggcc
ttctgcaagaagaagcgttatacttaccaccgcctggatggtcaaacaccgccgacgaaa
cgacaagagtatgtcaacgacttcaataagtcatcacaggcgactcggtttttattcctg
ttgagcgccaaggctggtggtgtggggctgaatctcatcggcgcgtcaagattggttctg
atcgactcagactggaacccaagccacgatttacaggctatggctaggattcatagagat
ggacagaaacatccggtcttcatctaccgcttcttgacagctggtaccatcgatgagaag
atatatcagcgtcaagtgacaaaattaggcctggcagattctctgatgggatcgagcaag
gctgagtcgaagtcagattccttctcccataaagaacttcgtgatatattcagaattcat
ccaaacaccgggtgtcaaacgcatgacattctggaatgtccttgcgacccgacgaatggt
aggaagcctgtggagcactcctcgcctagcatctgcctcgatgaagatgacgaagatatg
ggggatgtgacttcgggcttcgtcgttgcttcacagctgaagtctgaggatatcaacaag
atggacaaggcctatctccaaaagcaaaaagctgctctcgcaaccttgggcgaatgggca
cacatcaactgtctccagaagtcttcgaagataaacatacatgatcgcatccttcgtgat
ctcgtttactctccggaagatgaggtggaagacgaggagcctacggaacctaaatcccga
ctggatgcactactggaggctgcggatttcgacaatatagctgcactggacgaaccgaag
atgtcgctctctcccagggatattcctggagggtcaatatcgttcctctttgagagaggt
tcgaaggctccggtagaggaaggagaggaagatcaatag
DBGET
integrated database retrieval system
