Gloeophyllum trabeum: GLOTRDRAFT_129071
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Entry
GLOTRDRAFT_129071 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_129071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_129071
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GLOTRDRAFT_129071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
19301841
NCBI-ProteinID:
XP_007866055
JGI:
Glotr1_1_129071
UniProt:
S7Q979
LinkDB
All DBs
Position
Unknown
AA seq
2064 aa
AA seq
DB search
MVSSLAAQLAQGASLNTSLLVDRSKRKWAESYLFTGREADQHDLDSIHALGVSGFIRLKT
LNPALNAYEDALFSDATKGLDRTLLNVTANAELDKNIAGCLRLLGPYLMDAPTGRVIEWL
VRRFRINEFNVENVLRLFLPYHDSPHFAKMVSILHLDKQSKWAFLLPFKAAAQYLPRTAL
VTEMTRNTDLARFVASLFPSALEESSTYRALVAFHTGALLDFIAATKSLNEGQLAFVLPA
LLKPLQVTTPEKTPYVKDIVLGNYVLLAALSQKCTFSAAALKVIVDAAVSSSQHVSLNQS
IRAVVSICAPQEELEQFPDAALKKLLHTPDCGDVLKEILGFVGAEKFVNPLITGLLPHLK
NESAYVILEAILSSPEVPSAIVQRAARLLLGRVIDPESGDENMSQYRRILSLIQQRYPLV
LQKAAEETISEDEDAKEVVEQLILSLSMVQVSGGSGQVDEPNQDMIIAASNADPSVRNIA
VRNIYEMLDTSEDRAPSELQAIHLALLTRIHDSNISVLETLYSQPTLLLPILTQHKDTYL
STLSAVLLSNNTPSRPVIRLHIAFLCHHFCKANPSANREAFEKVLFAFLLFSKPRQRTAT
AVWEIIGAPEGQEGIGGYELLGGCVDAVQWEMSKQGASESEGKSAQTMGSTNLALASKIA
GNIVASNDYAQHLKYVLAKLQDPNAHARHLAYLTARALLGLVSGEHQVEAAHRLLGAMGL
NSLDGMGDFMTGVDTLHSFLNDEALGMTVVQKPNSWNTTRRLQTAILALLPVIVRPAHGA
VEWLSQPQPQQENDSEDSRGLRYVELMRKVYRLANSSSALPVLTSSLLRALFINLGDDSL
VFLAGIWTSPSEDAKDADEQRLREAALLHAAAFLAAHDGTDKVVDFQTILPSVLVALQDE
GIGVRRAAMECVSMIWRLSEVAEASSIYGIETIYGADTTKLQFLEWQDFKRYTNALVSHH
DHLVNDREYIINLHADMLGRKSSPKKEASYKQRILCYLLSHVNACSVPNARLRLLKMVEG
VSHRAKAEMLLPLLQGIAADPGAEASVAAMGDAFEEFCTLLVGCFDVSLTKEFNNGGSPV
WPVYLGTLRRASDEGFSASANMVLSRNLQGGLFASLVSERQVELCQVLLESSERNAKASY
GRALLSNIIREPQLLVQLFNGLALPALESGNRASKRAKYDSADTTNDDQNTLSSMTILAE
IVHAQPIVGSAELVTCLVETLGKVAHCDSWGQTEKSYIEQLLMSALERMSAQSIPDLKAS
SLRLDILVELIRGADNPQTFNQVLLLMASMARLAPEAVLHNIMPIFTFMGSNVFHRDDAY
SFNVVQKTIDSIVPVMVSSLKSGNSSKLDLIIASRDFLRIFVDASSHIPRHRRANFFAHL
VDVLGPDDFLAPLCMLFIEKSANRIVRQNLNELLSTLSLPMAIVEHCEPLVQLEALSEFL
LESQRLLHRLMNPEDTTSTFLDSMRVDDEQSSTKTLLYRRRARSLNIFVGQAAQHSPSLL
RSHRTPQSALAINALVSRFLQLVSMADAESKDEGVLDVVQAAQASLSQCLGVMHATDFLD
SVAAVLESDDAKIIIGALDVLSVRLPEVSDETRHTATPTIKRIIGSLERILGGSGNNSVK
SRAFIAVKAIGESACAGEENALLTMVPRILEAMRNGIATVHATAALPPIIAKIGPRVLPY
FRDIIQRCVSVIHGTTHDPADSAPAARTLSALLDSIPNLWGSGEITQVLETYLTAPDMSS
VSSAMDGVVKTATKKLPSSVLLSTLCNVPVYADSAAMSRPAKYFYLLRRALRVGERSVVM
DNLRPLLQVFLHGFEARQMAKHTVDELESSIITAFVEFVAKMNETAFRPIFRKLYDWAFG
DNGSDKDRKITFCHTYEALLDYFKNLMTPYMSFLMTPFIEILQTLSGSTTEGDPTLWSSV
LRILTETFRFDEGVFWRDDKLRQVAPALVGQVPVCLRMGTADGKRFLRDCLTAFVDAISE
EALLKKVNLDLLMHTRSDDPALRIYALDCSEAIWRNHGNKLLGFVAETSTFIAECAEDEN
DTVVTECRKLKETIESIAGKIDEL
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atggtctccagtctcgctgcgcagctcgcgcaaggcgcgtccctaaacacctctcttctg
gtcgaccggtctaaacgaaaatgggcggaatcatatctgttcactggacgagaggcggac
cagcatgacctcgattctatacacgctctgggtgtcagcggattcatacgactcaagaca
cttaatcctgcactgaatgcatacgaagatgccctgttctctgatgctacgaagggactt
gaccgaacacttttgaatgtgacggcgaacgcggagctggataagaatatcgcaggatgc
ttgagactccttggtccgtatctgatggatgcaccgaccgggagagtgattgaatggctt
gtgaggagattcagaataaacgaattcaacgttgagaacgtcctccggctgttcctccct
taccatgattccccccatttcgcgaaaatggtctccattttgcacctcgacaagcagtcg
aaatgggcgtttctgctccccttcaaagccgccgcccagtacctccctcgtaccgctctt
gtgaccgagatgacgcgaaacacagatctcgctcgtttcgttgcatcacttttccccagt
gccctcgaagagagttccacctatcgcgcactcgtcgctttccacaccggcgctctgctg
gacttcatcgctgcgaccaagtctctcaatgaaggacaactggcgtttgtccttccggcg
ctgttgaagcctctgcaggttaccacacctgagaagacgccgtacgtgaaggacatcgta
ctcggaaactacgtgctcctcgccgcactttctcagaaatgtacgttctcggccgcagcg
ctcaaagtgatcgtcgatgccgcggttagcagcagtcaacatgtcagtttgaatcagtcc
atccgcgctgtcgtgtcgatttgcgcacctcaagaggagctagagcaattcccggacgct
gcgctcaagaaattgctccataccccggactgtggcgatgtgctcaaggagatcttgggc
ttcgtcggggcagagaagttcgtcaatccgctaatcactggattgttgcctcatctcaag
aacgagtcggcatacgtcatactagaggcaatcttatcctcaccggaagtgcccagcgcc
atagtccaacgcgcagccagattgcttctggggcgcgtcatcgaccctgaaagtggcgat
gagaatatgagccaataccgtcggatcctatcgttgatccagcagcggtatcctctcgtg
cttcagaaggctgcggaggagactatctccgaagacgaagatgccaaggaggttgtggaa
cagctgatcttgtcgttatccatggtacaagtatcgggtggttctggtcaagtcgatgag
cccaatcaagatatgataattgctgctagtaacgcagacccaagtgttcggaatatcgcc
gtccgcaatatctatgaaatgcttgatactagcgaagacagggctccgtccgaactgcaa
gccatccacctcgcccttcttacgcgcatccacgatagcaacatctcggtgctagagacg
ctctactctcaaccgacgttgctcctccccatcctgactcagcacaaggacacctatctc
tcgacgctctcggccgtcctcctatccaacaacacgccttcccgcccggtcatccggctc
cacatcgcgttcctgtgccaccacttctgcaaagccaacccgtccgctaaccgcgaggca
ttcgagaaggtgctgttcgcgttcctgcttttctccaagccgaggcagcgcacggctact
gctgtatgggaaatcatcggtgccccggaggggcaggagggcattggcggctatgagctc
cttggagggtgcgttgatgctgtgcagtgggagatgagcaagcagggagcgagcgagagc
gaggggaagagcgcgcagacgatggggagtacgaacttggccttggcctccaagatagcg
ggcaacatcgttgcatccaacgactatgcgcaacacctcaagtatgtgctcgcgaagctt
caggacccgaacgcacacgcacggcacctcgcgtacctcaccgcgcgtgcgcttctgggc
ctcgtctccggggagcatcaagtcgaagcggcgcatcggctcttgggtgccatgggcctc
aacagcttggatggcatgggcgatttcatgactggagtcgacaccctccactccttcctc
aatgacgaggcgctggggatgacggtggtgcagaaaccgaacagctggaatacgactcgc
cgtttgcagactgcgatcctggctttacttccggttatcgtacgccccgctcacggggca
gtggaatggctttctcagccgcaaccccagcaggagaatgattcggaagattccagaggc
cttcgttatgtggaactcatgcgcaaagtttataggctcgctaattcctcatctgccctg
ccggttttgacgtcgagtctcctgcgtgcattattcatcaacctcggtgacgactcgctg
gtcttcctggccggcatctggacctctccctccgaagatgcaaaggacgcagatgaacag
cgtcttcgtgaagcagcccttctgcatgctgctgcgttccttgctgcccacgacggtacc
gataaagtagtcgatttccaaacgatactgccatctgtcctagtggcgttgcaggatgaa
ggaattggcgtgcgtcgtgctgctatggagtgtgtgtcgatgatctggcgactgtcggaa
gttgctgaagcttcgtccatatacgggattgaaaccatatacggagcggatactactaaa
ctacagtttctcgagtggcaagatttcaaaaggtacactaacgccctggtttcgcatcat
gatcacctggtcaatgaccgcgagtacatcataaaccttcacgcggatatgttggggcgc
aagagcagcccgaagaaggaagcaagttacaagcaacgaatactctgctatctcctatct
catgtcaatgcctgctccgttcccaacgcacgcctgcgccttctgaagatggtcgagggc
gtgtcacacagagccaaggcggagatgctattgcccttgctacaaggcatagcggcggac
cctggggctgaagcctcagtagctgcaatgggcgacgcattcgaggagttttgcacgcta
ttggtcggatgctttgatgtctctctcacgaaggagttcaataatggagggagccctgtc
tggcctgtttatcttgggacactgcggcgtgcttccgatgaaggattctcggcctctgcg
aatatggttctctctcgtaatctacaaggtggcttgttcgccagtctagtgtcagaacgt
caagtggagctttgccaggttttgctcgagtcgagcgaacgaaatgcgaaggcttcctac
ggcagagccctcctgtccaacatcattcgcgaaccacagctccttgtccaattgttcaat
gggcttgcgctgccggcgctggagtcgggcaaccgcgcgagcaaacgagccaaatacgac
agtgccgatactacgaacgatgatcagaacacgctatcttcaatgaccattctcgctgag
attgttcacgcccaacccattgtagggtcggctgagttagtgacttgcctggtggaaact
ctcgggaaagtggcgcactgcgattcctgggggcagacggagaaaagttacatagaacag
ctccttatgtccgcgctggaacggatgagtgcacaatccatacctgatctcaaagcgtct
tcactccggctcgacatccttgtcgagttgatcagaggcgccgataaccctcagactttc
aatcaggttctgcttttgatggcttctatggcccgcttggcgcctgaagctgtcctgcat
aatataatgcccattttcacctttatgggctcaaatgtcttccacagggatgatgcttat
agtttcaatgtggtacagaagacaattgacagtatagtgccagtgatggtttcctctctg
aagtctgggaacagctcaaagctggacttaatcattgcttcacgggactttcttcggatc
tttgtggacgcctcaagccatataccccgtcatcgtcgcgcaaatttctttgcccacctg
gtggacgtacttggaccagacgacttcttagcgccgctttgcatgctcttcatcgaaaaa
tcagcaaatcgtattgtgcgccagaatttgaacgaactactatccaccttatcgttacca
atggcgatcgttgaacactgtgaaccgctggtgcagttagaagctttgtccgaattcctc
ctggagagtcaacgcctccttcatcggctcatgaatcctgaagatacaacctccacattc
cttgacagcatgcgggttgacgacgagcaatcttcaaccaagacactcctctatagacgt
cgagctcgttcattgaatatttttgtcggccaagccgcacagcactccccgagtctcctg
aggagccaccgcacaccacagtcggcgctggcgatcaatgcgctcgtctctcggttttta
cagctagtctccatggcggatgccgaatcgaaagacgaaggtgtactcgatgtcgtccaa
gctgctcaggcttccttaagccaatgtctcggcgtcatgcacgctaccgacttccttgac
tcggtggccgccgttcttgaatcggatgacgcgaagataatcatcggagccttggacgtt
ctctctgttcgcttgcctgaagtctcggatgagaccaggcacacggcgaccccaaccatt
aagcgtatcattggttccctagagcgcatcctgggtggcagtggcaataactctgtgaag
tcgcgtgcatttatagcggttaaagcgattggcgagtcggcttgtgctggcgaagagaat
gcactcttgactatggtgccgaggatacttgaggccatgcgtaacggaatcgcaacagtg
catgccactgctgcactaccgcctataatagcgaagattgggcctcgcgtcctgccctat
ttcagggatattatacaacgatgcgtcagtgtcatccacggcaccacacatgatcccgca
gattctgcgcctgcggcccgcacgctctctgccctattggactctatccctaatctatgg
ggtagtggtgaaatcacgcaggtgctggagacgtatttgactgcaccagatatgtcaagc
gtttcttccgccatggatggtgttgtcaagactgctacaaagaaactgccgtccagcgtg
ctcttatccaccttgtgcaatgttccagtttatgcagattcggcggccatgtctcgtcct
gcgaaatacttctatctgttgcggagagccttgcgagtaggagagcgatctgtcgtcatg
gataatctacgacctctccttcaagtattcctccatggttttgaagctcggcagatggcg
aagcataccgtagacgagcttgagagcagcataattactgctttcgtggaatttgtggcg
aaaatgaacgagaccgccttcaggccgatattcaggaagctctacgattgggcgtttggc
gataatggctctgataaggaccgaaagattaccttctgccatacctacgaagctttgctc
gactacttcaagaatctcatgaccccttacatgtcattcctgatgactccattcatcgag
attctacaaacactcagcgggtcaacgacggagggagatcctaccctgtggagttccgtg
ctcaggattttgacggaaaccttccgtttcgatgaaggagtcttttggcgagacgataag
ctacgtcaagttgctcctgccctagtgggacaggtgcctgtctgcttgaggatgggcacc
gcagatggcaagaggtttctgcgagattgcctcaccgctttcgtagatgccattagcgaa
gaagcgctgctgaaaaaggtcaacttggacttgctgatgcatactcgttcggatgatcct
gctctgcggatatatgcccttgattgttcagaagcaatctggaggaatcatgggaacaag
ctgcttggcttcgtcgcggagacgtcgactttcattgctgagtgtgcagaggatgagaat
gacactgtggtgaccgaatgccgtaaattgaaggagacaatagagagtatagcagggaag
atagatgagctgtga
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integrated database retrieval system