Gloeophyllum trabeum: GLOTRDRAFT_129657
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Entry
GLOTRDRAFT_129657 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_129657
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLOTRDRAFT_129657
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
Pre-60S particles
Helicases
GLOTRDRAFT_129657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
DUF2742
Motif
Other DBs
NCBI-GeneID:
19301980
NCBI-ProteinID:
XP_007866589
JGI:
Glotr1_1_129657
UniProt:
S7RM67
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MTPVQASTIPLFMQNKDVVVEAVTGSGKTLAFVIPILERLTRRQEKLKKHEIGALVISPT
RELATQIHSVFSLFLDSQPSESESNEDNPSSPARRLPPALLLVSSDKSTPAQDVERFLST
GSDIVIGTPGRVEEFLLGKGKGVVSAKELEVLVLDEADRLLDLGFQATLTKIIAHLPKQR
RTGLFSATMTDADALSELVRVGLRNPARIVVKVQTKRNNGKKVSGEVIEERRIPANLQNL
YLPCRASEKVLQLTRIISHELKSNPTSRCIVYFATCACVDYFYRVLSPLLPSSVTLYSLH
GHLPPSARSKTLSSFAAAPSASILLATDVAARGLDLPDVDVVIQFDPPVDPKAFSHRCGR
TARAGRKGRAWVLLVGREEGYVDFMAVRKIPMKKHAYLTEDGSSVAHDERPEDPAVQPIL
QQIRKTVLTDRALHEKATKAFVSFVKAYSKHEASYIFRLKDLDLVGLAKTFGLLRLPRMP
ELKDAEKAGWVDADVDWDSYAFSDPAREAKRLSEAEESKSKDKAPAKSKKPKAKVAVAWS
EQLAKKEGKEKRREIKAAKRKWLKSQQTQEGMKRARADSEDADDWKELAREERMAKKVKK
GLVEQADFDNEFAEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgttcaagcatctaccattccccttttcatgcagaataaggacgtcgtcgtg
gaagcagtgacggggtccggcaaaacgcttgcgttcgttattccaatcctcgaacgactc
acccgaagacaggagaagttgaaaaaacatgagatcggagctctggtcatcagtccgaca
agagagctagcgacgcagatacattcagtattctcgctcttcctggattcacagccgtct
gaaagcgagtccaatgaagataatcctagctctcctgctcgtcgactacctccagcactc
cttcttgtgtcttccgacaaatcaacacccgctcaggatgtcgagcggttcctctcgaca
ggatcggacattgtgataggcacgccgggacgcgtagaagaatttttgttagggaaagga
aagggtgttgtgagcgcgaaggagctcgaggtactggttctggatgaggcggatagatta
ctggacctcggattccaggcgacattgacaaagatcatcgcccaccttcctaagcagcgg
agaacgggattgttcagcgctacgatgaccgatgcggatgccttgtcagaactggtgcga
gtgggcctccggaaccccgctcgtatcgtagtgaaggtgcagaccaaacggaataatggg
aagaaggtatcgggtgaggtgatcgaagaaaggaggattccagctaacctgcaaaacctc
tacctgccatgccgggcctcggagaaagtattgcagctcacccgtatcatctcccacgag
ctcaagagcaaccccacttcgcgctgtatagtctacttcgccacctgtgcatgcgttgac
tacttttaccgcgtgctctcgcccctcctcccgtcgagcgtcactctctactccttgcac
ggccaccttcccccatccgcgcgctccaagaccctctcgtccttcgccgccgctccatct
gcctcaatcctcctcgcgacagacgtcgccgcacgtggactcgatctccccgacgtcgac
gtcgtcatccagttcgacccgccggtcgacccgaaggcgttcagccaccgctgcgggcgg
acggcccgcgctgggcggaagggacgtgcatgggtactgcttgttgggcgcgaagagggt
tacgtagattttatggcggtcagaaagattcccatgaagaaacacgcctatctcacggaa
gacgggtcgtctgtagcccatgacgaacgccccgaggacccggcagtccagccaatacta
cagcagatacgcaagactgtattgacggatcgagcgctccacgagaaggcgacaaaggcc
tttgtctccttcgtcaaagcgtactcgaagcatgaagcgtcgtacatcttcagactgaaa
gacctggatctcgtggggctcgccaaaacgtttggattgttgcggttgcctcgcatgcca
gagctgaaggatgcggagaaggccggctgggtggatgcggacgtggattgggactcgtat
gcattctcggatccggccagggaagccaaacggctaagcgaagccgaggagtccaaatcc
aaggacaaagcccctgcaaagagcaagaagcctaaagccaaagtggccgtagcttggagc
gaacagcttgcgaagaaagagggcaaggagaagcgccgagagataaaggctgctaagagg
aaatggctcaagtcacagcagactcaggaagggatgaagcgcgcgcgagcggacagcgag
gacgcagatgattggaaggagttggcaagggaggagaggatggcgaagaaggtgaagaag
gggctggttgagcaggccgactttgataacgagttcgctgaattatga
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