Gloeophyllum trabeum: GLOTRDRAFT_135610
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Entry
GLOTRDRAFT_135610 CDS
T03130
Name
(RefSeq) NUC189-domain-containing protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_135610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_135610
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GLOTRDRAFT_135610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_Aladin
EIF3I
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
19303353
NCBI-ProteinID:
XP_007861308
JGI:
Glotr1_1_135610
UniProt:
S7QNE7
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MSSLPTKSKKNRVKPPKSRPAGTSAISHPVVEDASNLNALSRFSPRGDLFALVSLSVDKH
RLRVYNTSTGNAAAESIIDSARVTALCWCAHIQSGPEGEAEALPPNKKRRKKRSSQIGSA
ASDGSGSQGEQIVALGLADGTLQFFSPKHARVIWTLSHPTCSSPILDISINEDDGSIWTS
SADGNIRRWDAQQKTMTASYKYNDRTPYPCLAIRPGVPEDNHAHVLAANYGIHLLLVPTS
DDDITTESSGLDEVASFTGHASPVTCLLWDSKQRFVSMAERDRHVYVWDTLDEPPEDENI
SSTGKPAASIPLDSDARVIALSASPTRIDAAPQNLLTLSASGKISLFSIPPEITSLRSNS
KHKVPTLEPLSNISISSKRSDAHADTINASFIPSEEGRIRVVRLVGGVRPIFSVVDYLDE
SGNFKQSISIVSDDAVLESAAHASTNGVVNKRYNERSSIAVASGVDLGQDASMDDLPVRE
LDGDLDVNVAELSLGERLTALSGADDAAAPGSASDSENPAAGPESRSRTGKRDDPFHIVP
ANSLTRTLIQALHSSDSPLLETCLAHSDNVLIRNTVQRLPPQLAVPLLNACVERLSRGPR
ANNMKGGGGGASAQRGMALITWVKSVLTIHSGHLMTMPDLVARLSGLHTTVASRLSLHES
LLLLNGRLDMVLSQVEMRSSAAPAPVAARKRSQGANKEKAVKRYVEGESDEADDQMDVEV
ESGDDAGSIEDVELGGESEDEEDDDEDEGQADSESDEEGGPTSNGFIDDEAEEDFEEDEE
DDYSE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccctaccgactaaatccaaaaagaatcgcgtcaaaccgcccaaatctcgacct
gcaggcacctccgccatctcgcatcctgtggtcgaagatgcatcgaacttgaatgcttta
tcacgtttctcgcctcggggggacttgttcgccttggtatcgctttctgtcgataagcat
cggttgcgcgtctataacacatctactggcaatgcagcggctgaaagcattatagactcg
gctagagtcacagcgctatgttggtgcgcacatattcaaagcggcccagaaggcgaagcg
gaggcactccctcctaacaaaaaacggcggaagaaacgatccagtcagatcgggtcggct
gctagtgatggttccggttcgcagggagagcagatagttgcgctgggtctcgcagacggc
acacttcaattcttttcaccgaagcatgccagggttatttggacgttatcgcacccgacc
tgctctagccccatcttagatatctccattaatgaagatgatgggtcaatatggacttcc
agtgcggacgggaatattcgccgatgggacgctcagcagaaaaccatgacagccagctac
aagtataatgatcgaacaccgtacccctgcttggcgatcagacctggcgtccccgaagac
aatcacgcccatgttcttgctgcaaactacggtatccatcttctacttgttcctacttcc
gacgacgacatcaccacggagagcagtgggcttgacgaagttgcgtcctttactggacac
gcatctcctgttacttgccttctctgggactcgaagcaacgcttcgtgtcgatggctgaa
agggatagacatgtctatgtctgggacaccctggatgaaccaccggaagatgaaaatata
tcctccactggcaagcctgccgcttcgatacctctggattccgacgctcgagttattgca
ctgtccgcttcgcctaccagaatcgatgcggcgccacagaaccttctcactctttcggct
tcggggaagatatcattattctccatcccacctgagatcacatcactccgttccaatagc
aagcataaggttccgacgctagagccgctttcaaacatctcgatatcttcaaaacggagt
gatgctcacgcggacaccattaacgcctcgttcatcccatccgaagagggcagaatacgt
gtggtaagactcgttggtggagtgcggcctattttcagtgttgtcgattaccttgatgaa
tcgggtaacttcaaacaatctatatccatcgtcagtgatgacgctgttctggagtcagct
gcgcatgcctccacaaatggggtcgtcaacaagcgttataacgagcgatcttcgatcgcg
gtcgcatcaggcgttgacttgggtcaggatgcgtccatggacgatctacccgtacgggaa
ctggacggcgacctcgatgttaatgttgcagagcttagcctgggggagcgattgactgcg
ttgtctggcgcagatgacgcggcagctcctggcagtgcttctgacagtgagaaccccgcc
gctggaccagaatcgcgatcaaggacggggaaaagggacgaccccttccatattgtacct
gccaattcgctgacgcggaccctgattcaagctctacattcctctgactcgcccttgctg
gagacgtgtttagcgcattcagacaatgtgctgatacgaaatacagtgcagaggttgcct
ccgcagctagctgtaccactgctgaatgcgtgtgtcgagcgcctcagcaggggtccgcga
gcaaacaacatgaaaggcggaggtggaggagctagtgcgcagaggggaatggcgcttatt
acctgggtcaagtccgttctgactatccatagcggacacttgatgacaatgccggatctc
gtagcgcgcctctctggattacatacgactgtcgctagcaggctgtcgctacacgaaagt
ctgctcttgttaaacggacgactcgacatggtactttctcaagtcgagatgcgttcatcg
gcggcacctgcacctgtagccgctcgtaagagaagtcaaggtgctaacaaggaaaaggcg
gtaaaacggtatgttgagggcgaaagcgacgaggcggatgatcaaatggatgtcgaagtg
gagagcggtgatgatgctggtagtatagaagacgtggagctgggaggagagagcgaggat
gaagaggatgacgacgaagatgaaggtcaagcagacagcgagagcgatgaagagggcggt
cctacatcaaacgggtttattgacgatgaagccgaggaagacttcgaggaggacgaggag
gacgattacagcgaataa
DBGET
integrated database retrieval system