Gloeophyllum trabeum: GLOTRDRAFT_136148
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Entry
GLOTRDRAFT_136148 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLOTRDRAFT_136148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_136148
03016 Transfer RNA biogenesis [BR:
gtr03016
]
GLOTRDRAFT_136148
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
GLOTRDRAFT_136148
Transfer RNA biogenesis [BR:
gtr03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
GLOTRDRAFT_136148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Sec61_beta
Motif
Other DBs
NCBI-GeneID:
19303478
NCBI-ProteinID:
XP_007862267
JGI:
Glotr1_1_136148
UniProt:
S7QIP7
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MTDTEVIDLTAPSSPILVDEDSDGGPPSSSKPQPDATKDQKRKRKKKKRPVVDSAPEEGE
VTSAPDNKAVSVAGDEGPPLFFVDLAPAPLSSASEPAPKVGESSKSAALEAASAQNEPAK
LLLPDHVSVLSQGVGVPVEVITRPDEDSDDEAYIEYLDYDDRKAPGMVRYFEEEKEEPKQ
QKITCPQRFTIRGTQVNNYDDCDRCGSSRHHTNECPTLWRLYHYVSDADRETILRVREEK
SVLGVGNGGEGYIATDEWCYNCGESGHLGDDCNSLPHPPDHPLEPSAFSSYNIMSGPFFD
ATTSLSKGKARRPRDWETSDHVGDGWGFNAPMNVGKQGRKKDRARMEQVAKHQEEEEDPD
DWFGNPRNARNRGMTRDAQPPRNVRSEIGNENKVFTFGSMGNDRNRRFEIESSVNASRGS
RYDKDRNDRYRGERAPDTFKSGLGGTTTTVLTVKSVETITVPGTKGGMPTNLY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacggaggttatcgatcttacggcgccatcttctcccattcttgtggacgag
gatagtgatggcggccctccttcaagcagcaaaccccagccggacgcgaccaaggaccag
aagcggaagaggaagaagaagaagcggcctgtggtggatagcgcgcccgaggagggcgaa
gtaacttctgctccagacaataaagcagtctctgtggctggagacgaaggccctccgctt
ttcttcgtcgacctggcacctgcaccgttgtcctctgcctcggaaccagctcccaaagtc
ggggaatcaagcaaaagcgcggctctggaggctgcgagtgcccagaatgagccggccaaa
ttgcttctgcctgatcacgtatccgtgctgagccaaggagttggcgtacccgtagaagtc
ataacccgaccggatgaagattcggacgacgaggcctacatcgaatatcttgactacgat
gacaggaaggccccgggaatggtgcgctacttcgaggaagagaaggaggaaccgaagcag
cagaagattacctgtccccaacgattcactattcgtggaactcaagtgaacaactacgac
gactgtgacagatgtgggtcatcgcgacatcatacgaatgaatgccctactttatggcga
ctgtatcactatgtttcagacgctgaccgagagacaatcttacgggtcagggaagagaag
agtgtattaggcgtcggtaacggtggcgaaggctacattgccacagacgagtggtgttac
aactgcggcgaatccggccatctgggcgacgattgcaattctctaccacacccgcctgat
catcccctggagccatcggcgttcagctcttataacatcatgtcgggcccgttcttcgac
gccaccacctccttgagcaagggcaaagccagacgacccagagattgggagacttcagac
catgtcggggatggatggggtttcaatgcaccgatgaatgttggaaagcaggggagaaag
aaagatcgagcaagaatggagcaggtggccaaacatcaagaagaggaagaggacccggac
gactggtttggcaacccgaggaacgcgaggaatcgtggcatgactcgggatgcgcagcct
ccgcgcaacgtccgcagcgagataggcaacgagaacaaggttttcacatttggcagcatg
ggtaacgacaggaatcggaggtttgagatcgagagttcagtcaacgcttctagagggtcg
cggtacgacaaggataggaacgacaggtataggggcgagcgtgccccagatacgttcaag
agcggtctcggcggaacgaccaccaccgttctgaccgtcaagagcgtcgagacgatcacc
gtccccggtacaaaggggggtatgcctactaatttatattag
DBGET
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