Gloeophyllum trabeum: GLOTRDRAFT_136831
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Entry
GLOTRDRAFT_136831 CDS
T03130
Name
(RefSeq) transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_136831
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_136831
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
GLOTRDRAFT_136831
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
GLOTRDRAFT_136831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
HTH_44
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
S1
SH2
HHH_3
Motif
Other DBs
NCBI-GeneID:
19303634
NCBI-ProteinID:
XP_007863321
JGI:
Glotr1_1_136831
UniProt:
S7QF83
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MASPVQDPVPTTAPDDGDDPMQGSGQEEEGEGDDIRPAGGSEDDSSEEEEEDEEEARRIR
EGFIVDEDEDEGEEEEEERRRRRKRRKRRHRREREEEEALEDEDLELLEENTGASFKNRL
TRLRRGRDDESPPTASSSKRRVVEESSEDDIENDDLELPAIQDIHRIWDEGAREDEDEDM
DDMDNFIEYEDDEEGVEMMDEREREEKRRERRRLEKQRRKALGRPELAGIDANAWDEIHE
VFGDGHDYDWALVDEDDAEYDEEKLKPEMKYQDVFEPSEIRARMLTEDDDLIRAQDVPER
MQLATSSLSPSSTLSLHKPLTDNDIDDAAQWVLTRLSTRKERDFFRRDGQYNHLLADLVQ
AASYALRYLFVHEFEVPYIWTHKRDYISYFNPADMRTRVELLSLDELWRLYSLGQKYRSL
MERRHHLDALYARLGVSDEYFENEIRRRLESVEVVADATEWLGMKYKDKKKDQFELHFHD
DEEPEAPKRKNPSRTSAYQVAKNSVVARLAQGFGITPHEIVLNFLASNNSHFVEDQEVNP
TAYAEQFADPNSSKIESPEELLRRARLIISTELGKDPLLRQEIRNVFKSEARISVSPTER
GITKIDEHHPYYNFKYLHWKRVTDMLQTPQFLHILAAESEHLVTVSIFLPPEAKSSFERR
LNEAFASDSFSDTAKAWNEERSKVVQETIEQHLLPLGMKWTREWVREEVEDFLANRCGDV
LRERIDVAPFNTADMQLGDTPSVLAMSWGKGDPQKDDIALVFLDEAGRLREHTRLDNLVD
ADNRHDFRDLLKRRKPDVIAIGGFSITTTKLAHTVKDLLKGGPMDAYGNWPEEKFDIPVI
YMFDEVARLYQHSNRASEEFGSLSEIAKYCVGLARYAQNPLNEYAALGGDVTAITFEEDF
QQLIPREKLLTALERVLVDIVNKVGVDINRAVTDSYYQHLLPYICGLGPRKAQLVVKKIA
SMGGNLVNREQFVKNGLLTTKIFLNAAGFLRITHDIETTKSSKNRHNDDVDTPDPLDNTR
IHPEDYELARKMATDALELDEEDIQEESPSHVVSLIMQDDDSERKLDELNLDDFAVNMYE
NSKDRKRHTLNVIRRELIHPFAEQRSKFPLPSAWEVLTMLTGETPRTLRIGLIVSVLVVR
PKKHFVAVRLDSGIEGMINAQYLADQSVDSETYVKKGQTIPGVIIDVKLNLQEDQFSVEL
SSRPADVQAGDSQFRRVKHDEDWNLHQEERDKEMQARKKRAEVDRTRRVIKHPNFHNFNA
SQAEAYLDKQQRGDVVIRPSSKGFNHLAVTWKVDDKLFQHLDVVEPNADPTGQAVGTRFI
VDGKYEFADLDELIVNHVQAMARRVEELMAHEKFKHGSEEELHLFLKNFVAANPSKSAYG
FTLNRKRPGHFNLCFLANKNSTVQSWPVRVAPEAYYLFDTAAPGVQELCDAFKIRHLHES
QNLAAGGAGGKTPYGAGRTPARTPGHMTPGHMSVRQSARTPNPYGGTPSQPGPPAGFGST
TPSTYGMPPPQTTYGYQTPSSYPPRTPAFPQQPAPPSGMNPARAAMIQQSGGWGTGSGGT
W
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgccagtacaagatccagtcccgacgactgcccccgatgacggggatgacccg
atgcaaggttccggacaggaagaagaaggcgaaggcgacgacattcgccctgcaggtgga
tcggaagacgatagttccgaggaggaggaggaagatgaggaggaggccagacgtatacgc
gagggcttcatagtggatgaggacgaagatgaaggggaagaggaagaagaagaacggcgg
cggaggaggaagcggcgaaagcggcgccatcgcagagaacgtgaagaagaggaggctctg
gaggatgaggacctcgaactgctagaagaaaatacgggtgcttcattcaagaaccgtctg
acgcgcttgcgacgcggtcgggacgacgagtctccgcccactgcttcgtcctcgaaacga
agagtagtcgaggaatcttcggaagatgacatcgagaatgacgaccttgaacttcctgca
attcaagacattcatcgcatctgggatgaaggagctagagaggatgaagacgaggatatg
gacgacatggacaacttcatcgagtatgaggatgatgaagagggtgtggaaatgatggac
gagcgtgaaagagaagagaagagacgagagaggaggcgactggagaagcaacgacgaaaa
gctctcggccggcctgagctcgctgggattgatgcgaacgcgtgggacgagatccacgag
gtattcggggatggtcatgactatgactgggctctggttgatgaggatgacgctgaatac
gatgaggagaaactaaaacctgagatgaagtaccaggatgtctttgaaccgtccgaaata
cgtgctcgtatgttaaccgaggacgacgacttgattcgggcgcaagatgtcccggaaaga
atgcagctggccacatcgtctctttcgccgtcttccactctttcattacacaagccgttg
actgataatgatatcgacgacgcagctcagtgggtcttgactcggctgtcaactcgcaaa
gagcgggacttcttccgccgagacggccaatacaaccacttgctcgcggatttggttcaa
gcggcttcatacgccttgcgatatctgtttgtccatgaattcgaggtcccttacatctgg
acgcacaagcgagactatatctcatatttcaatcccgccgacatgcggacaagggtggag
ctgctcagtctggatgagctttggcggttgtacagtcttggtcagaaatatcgatcgctc
atggagcgccggcatcatctcgatgctttgtatgcccgactgggtgtctcggacgagtat
ttcgaaaatgaaatccgacggaggctggagagtgtcgaagttgtcgcggacgccaccgag
tggttgggaatgaagtacaaggacaagaaaaaggaccagttcgagctccatttccatgat
gatgaggaaccggaggcccctaagcggaagaatcctagtcggacgtccgcgtaccaagtc
gcgaagaacagtgtcgttgcccgactagcgcagggctttggtatcacgccccacgaaata
gttctgaatttccttgcttcgaacaattcacatttcgtggaagaccaagaggttaatccc
actgcatatgccgagcagtttgcagacccgaattcttcgaaaatcgagtctcctgaggag
ctcctccgtcgtgctcgactcattatctcgactgagctagggaaagatcctctgctccgg
caggagattcggaatgttttcaaaagcgaagctcgtatctcggtatcgcccacggaacgc
gggatcacgaagattgatgagcaccacccgtattataacttcaaatacctgcattggaag
agagtcactgacatgctccagacacctcagttccttcatatcctcgctgctgagtcagag
catctcgtgactgtttcgattttcctaccacctgaggcgaagtcatcatttgaacgccga
ttgaatgaagcgttcgcgtcagacagcttcagcgatactgcaaaggcgtggaacgaggaa
cgatcgaaggtagttcaggaaacaattgagcaacacttacttcccctgggtatgaagtgg
acacgcgaatgggtgagggaggaagtggaggatttcctcgcgaaccgttgcggagatgtt
ctgcgtgagcggatcgacgtggcgcccttcaacacggccgacatgcagctcggcgacaca
ccctcggtccttgcgatgtcttggggcaaaggtgacccgcagaaggacgacatcgccctg
gtcttcttggatgaggctggcagactacgcgagcatacaaggctggataacctcgttgat
gcagataaccgtcacgacttccgcgacttgttgaagcgtcgcaaaccagacgtcattgcc
attggtggtttcagtataactaccaccaaactggcacacaccgtcaaagatttgcttaag
ggaggtccaatggatgcatacggcaattggcccgaggaaaagttcgatattcccgtcatt
tatatgttcgatgaagttgctcgcctctatcagcacagcaacagggcttctgaagaattc
ggatcattgtctgaaatcgccaagtactgtgtggggttagcacgttacgcgcaaaaccct
ctaaatgaatatgctgcgctgggtggcgacgtgaccgccataacattcgaagaagacttc
cagcaattaatccccagagagaagcttctgactgccctcgaacgtgtccttgtagacata
gtcaacaaagtcggcgtggacatcaacagagctgttacggactcgtattaccagcatctc
ctgccatacatctgcggtctgggaccacggaaggcacagcttgttgttaagaagattgca
agtatgggtggcaatcttgtgaaccgtgaacaatttgtcaagaatggactgctcactacc
aagatcttcctcaacgctgctggatttctgcgtatcacacatgacatcgaaacaactaag
tcgtctaagaatcgtcataacgacgacgttgacacgccggaccctctggataacactcga
atccatcccgaggattatgagttggccaggaagatggccacggacgctctcgagctggac
gaggaggacatccaggaagagtcgccatcgcatgtagtgtctctgatcatgcaggacgac
gacagcgaacgaaagctggacgaactcaacctcgacgatttcgctgttaatatgtacgaa
aacagcaaggaccgcaagcgacataccctgaacgtcatacgacgggaacttatacaccca
ttcgcggaacagaggtctaaattccccttaccgagcgcttgggaggttctgacaatgctc
acgggcgaaacaccgaggaccttacgcatcgggttgatcgtctccgtactcgtggttaga
cctaagaaacacttcgttgctgttcgtctcgattccggcattgaaggcatgatcaatgca
cagtatctcgctgatcaatccgtcgactcggagacctacgtgaagaaggggcaaaccatc
cccggggtcatcatcgacgtcaagctgaacctccaggaagatcaattctcggtcgaatta
tcttcgcgtcctgctgatgtccaggcgggagacagccaattccgtagggtcaagcatgac
gaagattggaacctgcatcaagaggaacgggataaagagatgcaggctcggaagaagagg
gcagaagtcgaccggacaagacgcgtcatcaagcacccaaacttccacaacttcaatgct
agtcaagctgaagcctatctggacaagcagcagcgaggcgatgtggtgatcagaccatca
tccaaaggttttaatcatctggctgtgacttggaaagtcgacgataagctttttcagcat
ttagatgttgtggagccaaatgccgatcccaccgggcaggcagtcggcactcgtttcatt
gtggacggcaaatacgagttcgccgatttggatgagctgatcgtgaaccatgttcaggcc
atggctcggagggtcgaagagttaatggcccacgaaaaattcaagcacgggtctgaggaa
gagttgcacttgttcctcaagaatttcgtggctgccaacccgtcgaagagtgcatatggc
ttcactctgaatcggaaacgacctggccacttcaacctatgcttccttgcgaataagaat
tcaactgttcagagctggccagtccgggttgcccccgaagcctactatctcttcgatact
gccgctcccggtgttcaagaattgtgtgatgcttttaaaattcgacatttgcatgagtcc
cagaatctggctgccggcggcgctggcggaaaaacaccatacggcgctgggcggacgcct
gcccggacgccaggacacatgacacctgggcatatgtctgtcaggcaatcggctcggacg
cccaatccttacggtggtacgccatctcagcccggacctccagcagggtttggctccact
accccctctacttacggaatgccacccccacaaacaacctacgggtatcaaaccccgtct
tcctatccacctcgcacgcccgcgtttcctcagcagcctgcgccgccctctggaatgaat
cctgctcgcgcagctatgattcagcagtcaggtggatggggaaccgggtcgggtggtacc
tggtga
DBGET
integrated database retrieval system
