Gloeophyllum trabeum: GLOTRDRAFT_136900
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Entry
GLOTRDRAFT_136900 CDS
T03130
Name
(RefSeq) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03022
Basal transcription factors
gtr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GLOTRDRAFT_136900
09124 Replication and repair
03420 Nucleotide excision repair
GLOTRDRAFT_136900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_136900
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_136900
Enzymes [BR:
gtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GLOTRDRAFT_136900
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GLOTRDRAFT_136900
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GLOTRDRAFT_136900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
nSTAND3
DUF2058
Motif
Other DBs
NCBI-GeneID:
19303655
NCBI-ProteinID:
XP_007863392
JGI:
Glotr1_1_136900
UniProt:
S7RXN0
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MKFFIDNLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCVLEMPSGTGKTVSLLSLIVSYQ
QFYPARRKLIYCSRTVPEIEKALSELKRLMDYRIACAETEEDKRKERSFTGLGLTSRKNL
CIHPEVSKEKKGKVVDARCRDLTNSAVCEKGRANPGSVELCDFHEKLGEKEPGNLIPTGI
YTLADVLQYGRENGTCPYFTVRRMMPFVDVIIYSFHYLLDPKVAEQVSKEMSKDAIVVFD
EAHNIDNVCIESLSVDLTRPMLDSAVRSVTKLGEKIDEIKRTDASKLQDEYAKLVEGLQE
ASDARDEDAFMANPVLPDDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETP
LSFLQHLKDITYIERRPLRFCAERLQSLVRTLEITRVDEFSALQKVASFATLVATYEKGF
LLILEPFETENATVPNPIFHFVCLDPAIAIKPVFERFSSVVITSGTISPLDMYPKMLQFT
PVVQETYPMTLTRNAFLPLIITRGSDQVAISSRFEVRNDPAVVRNFGSILVEYSKIVPDG
IVAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACNNGRGA
VLLSVARGKVAEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGF
DAIRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRSKLPRWIQQYITETTSNLSTDMAL
TLSKLFMRTISQNPNENQTGVSLWTLEDIEKAQAKQKEMALLEAEQQRDEPMDEDDEYGD
GGFDDRILGEINLDI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctttattgacaacctacctataattttcccttatgaccgcatctaccctgaa
cagtatgcatacatgtgcgacctcaagaggacacttgacgcaactggtcattgcgtactc
gagatgccttcaggaacaggaaagactgtatccctgctctccctgattgtatcataccag
caattctaccctgcacggcggaaactcatctactgctcacgtaccgtgcccgagatcgag
aaggccctgtcagagttgaagcgacttatggactaccgaatagcatgcgcagagacggaa
gaggacaagagaaaggagaggagcttcaccggactgggccttactagccggaagaatctc
tgcattcaccccgaggtctcgaaagagaagaaggggaaagtcgtggatgcccgctgtaga
gacttgaccaactcggccgtctgtgagaaggggagggcaaacccaggctccgtggagctg
tgcgatttccatgagaaactaggcgagaaagagcctggcaacctcatcccaacaggcatc
tatacgctcgccgacgtactacagtacggtagggagaacggcacatgtccttatttcact
gtccgacgaatgatgccctttgtggacgtcattatctactctttccactacctcctggat
ccgaaggtcgcagaacaggtatcgaaggagatgtcgaaagacgcgatcgtcgtctttgac
gaggcgcacaacatcgataacgtttgtattgaatctctgagcgtggacctcactcgtccc
atgctcgactcagctgtccggagcgtgaccaagctcggtgagaagatcgacgagatcaaa
cgcacagacgcctcaaaactccaggacgagtacgccaagctcgtggaaggtttgcaagaa
gcctccgacgcgcgcgacgaagacgccttcatggcaaatcccgttctcccggacgatctc
ctgaaagaagcaatccctgggaacatccgaaaggctgagcacttcgtggcgttcttaaag
cggttcgtggaatatctgaagactagaatgcgggtgttgcacgtggttgccgagacgccg
ctgtcgttcttgcagcacctgaaagatatcacgtatattgagcggcgccctctccgattt
tgcgcggagaggttgcagtctttggttaggactttggaaataacacgagtggacgagttt
tccgcccttcagaaggtggcctcgtttgcaactttggtagccacatatgaaaaaggtttc
ctccttattctcgaaccttttgagacagaaaacgcgacagtgcccaacccgatcttccac
tttgtgtgcctggaccctgccatcgctattaagccagtcttcgagcggtttagcagtgtg
gtgatcacgtcggggaccatctctccgctggacatgtatccgaagatgttgcagttcact
ccggtggtacaagaaacttaccccatgacactgacgcggaatgcatttctgcctttgatt
atcacccgtggcagtgatcaagtcgccatcagttctcgcttcgaagttcgtaatgaccca
gcggtagtccggaatttcggtagtatactcgtggagtactcgaagattgtaccggatggt
atcgtcgctttcttcccaagttatttatacatggaatctatcgtggctgcttggaacgac
atgggaatattgaacgaagtgtggaaacacaagctgatattcgtggagaccccggacgcc
aacgagactagcatcgcgttggagaattacagacgggcttgcaataacggccgtggcgcg
gtcctgctttccgtcgcgcgaggcaaagtcgccgaaggaatcgattttgaccataattac
ggaagagctgtcatcatgtttggcgttccgtatcaatatacggaaagccgtatcctcaag
gcccgtctcgaatacctgcgcgacgcttaccggatacgtgaatccgagttcctgggattt
gatgccattcgtaacgccgctcagtgtgtgggacgcgtcctgcgtggtaaaaccgactgg
ggtctcatggtctttgccgataagcgcttcgcgagggctgacaagcggtcaaaattgcca
cgctggattcaacagtatatcaccgagacaacatcaaacctatcaactgatatggcattg
acgctctcgaagctcttcatgcggaccatctcacagaatcccaacgagaatcagacggga
gtctccctgtggacactggaggacattgagaaagctcaagctaagcagaaggagatggct
ctcctggaggcagaacaacagcgagacgaaccaatggacgaagatgatgagtacggagac
gggggattcgatgaccggattctaggtgaaatcaatctggatatctaa
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integrated database retrieval system
