Gloeophyllum trabeum: GLOTRDRAFT_138046
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Entry
GLOTRDRAFT_138046 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03030
DNA replication
gtr03410
Base excision repair
gtr03420
Nucleotide excision repair
gtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLOTRDRAFT_138046
03410 Base excision repair
GLOTRDRAFT_138046
03420 Nucleotide excision repair
GLOTRDRAFT_138046
03430 Mismatch repair
GLOTRDRAFT_138046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtr03032
]
GLOTRDRAFT_138046
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_138046
03400 DNA repair and recombination proteins [BR:
gtr03400
]
GLOTRDRAFT_138046
DNA replication proteins [BR:
gtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GLOTRDRAFT_138046
DNA Replication Termination Factors
ELG1-RFC complex
GLOTRDRAFT_138046
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GLOTRDRAFT_138046
DNA repair and recombination proteins [BR:
gtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GLOTRDRAFT_138046
Check point factors
HRAD17(Rad24)-RFC complex
GLOTRDRAFT_138046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_11
AAA_30
RCF1-5-like_lid
DUF815
AAA_14
ResIII
RuvB_N
AAA_16
AAA_22
AAA_24
AAA_5
AAA_19
AAA_7
DEAD
ATPase_2
AAA_3
AAA_28
bpMoxR
Viral_helicase1
nSTAND3
AraA_central
SRP54
Mg_chelatase
AAA_25
Motif
Other DBs
NCBI-GeneID:
19303896
NCBI-ProteinID:
XP_007865026
JGI:
Glotr1_1_138046
UniProt:
S7QA63
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MDSDEDTRMMDAEPIPSALKGKGKAVEQANGHDEDNLPWVEKYRPVTLDDVVSHKHITST
IEKFIEKNRLPHLLFYGPPGTGKTSTILAVARRIYGKDYKKMILELNASDDRGIDVVREQ
IKQFAETRTLFSTGFKLIILDEADMMTQAAQAALRRVIEHYTRNVRFCIICNYVNKITPA
IQSRCTRFRFSPLPIPEVERRLEGVIEAEKVKLTEDGRKALLKLSKGDMRRALNVLQACH
AAYDLIGETEIYNCTGNPHPSDIETVVNSMLSDEFTTSYQMISALKTERGLALQDLIAGA
YDYIDTIDFKPHARVYLLDHLATTEYRLSTGGNEKIQFTALLGAFKNAVELSAKST
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgatgaggacacgcgaatgatggacgcagagccgattccctctgcgctgaag
gggaaggggaaggcggtcgaacaagccaatggtcacgatgaggacaacttaccatgggta
gagaaatatcggccagtaacattggatgacgtcgtctctcataaacacatcactagtaca
atcgagaagtttattgagaagaacagattgccacatctcctcttctacggccctccagga
acgggcaaaacgtcgactattctcgctgtggctcgtcggatatatgggaaggattataag
aagatgatacttgagctcaatgcctcggacgatcgtggtatagacgtagttcgagagcaa
atcaaacagtttgccgagacacgcacgttattctctacgggattcaagctcatcattctg
gacgaagcggacatgatgacacaggctgcccaagctgctctaagacgtgtaatcgagcat
tataccaggaacgtgcgattttgtatcatctgcaactacgtgaacaagattaccccggcc
atccaaagtcggtgtacgcgctttcgtttctcacctctaccaatcccagaggtagagagg
aggctggaaggagtcattgaggctgaaaaagtgaagctgactgaggacgggagaaaggca
ttgctgaagctctcgaagggtgatatgcgaagagctctgaatgtactccaagcttgccac
gcagcgtatgacctaattggtgaaacggaaatctacaactgcacgggaaacccacatccg
tcagatatcgagaccgtcgtgaactccatgctttcggacgagttcaccacgtcatatcaa
atgatttctgctctgaaaacagagcgagggttggcactccaggatctcatcgctggcgcg
tacgactacatcgacaccatcgacttcaagcctcacgccagggtctacttgttagaccat
ctggccacgaccgagtatcggctgtccactggcggaaacgagaagatccagttcacggcg
ctgctaggcgcattcaagaacgccgtagagttatccgcgaaatcaacgtag
DBGET
integrated database retrieval system
