KEGG   Gloeophyllum trabeum: GLOTRDRAFT_138171
Entry
GLOTRDRAFT_138171 CDS       T03130                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
gtr  Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gtr03009]
    GLOTRDRAFT_138171
Ribosome biogenesis [BR:gtr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    GLOTRDRAFT_138171
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st EIF3I Beta-prop_EML Beta-prop_WDR75_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR19_1st WDR90_beta-prop_4th WDR54 Beta-prop_RIG_2nd Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_Vps41 NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_2nd WD40_alt DUF7310 Beta-prop_IFT122_1st Beta-prop_WDR19_2nd DUF4349 DUF6752 Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 19303920
NCBI-ProteinID: XP_007865173
JGI: Glotr1_1_138171
UniProt: S7Q8Y1
LinkDB
Position
Unknown
AA seq 512 aa
MKLHEVILCAASTSTSNAGPGLIAVHDIQSGSTLASFKQTNTSSRCLAVTESRDGLGGVM
FAAQHEKSLLNVYNFQKDQLALKIVLPEKLTCCASDHRGQFFAGGTAQGRIYIWEISSGI
LYNAWDAHYRQVNVLRFTPDGAALVSGSEDSGVSVWEVSRLLDDNLQNELPVSYCTFTDH
TLPVTDLVCGVGPFPTSRILTSSVDHTVKLWDLGARTLLTTFHFPQPISHLAWEPTERVF
FAASSGDDGTIYQMNLFKQTRAGKNAIVEAIGGGGATDIVRIGDDDGSAPKKMSIQVDQP
ITALCISLTSSLLVVGTSLGTIQTYDIPSHQPLRSINTHKGLAITHLSTMIRPPDLVGHV
NIQLGLSSGVGVSGAAGQGEVISLRSVVPFDRTRDPRKREAREVGIILPVQGDVPYIDPA
EYPEDELFRDHAYFTQQMVPAASGANGVGAVSLQSRVAELETEVQKLRDQLGKAKNVNDV
MWETVVKKVIKEGKGGGDADASEEPKRKRGRT
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgaaactacacgaagtcatcttatgtgcagcgtcaacgtcgacttccaatgcagggcct
gggttaatagccgtgcatgatatccagtcaggttccaccttggcctccttcaagcagacc
aacacctcttcacgatgtcttgctgtcactgagtctcgggatggactaggcggtgttatg
tttgccgcgcaacatgaaaagtctctcctcaacgtctataacttccagaaagaccaactc
gctctaaagatagttttgccagagaagttgacatgctgtgcgagtgatcataggggacag
ttctttgctggtgggacagcccagggacggatatacatctgggagatatcatccgggata
ctatataatgcatgggatgcccactatcgccaagttaatgtccttcgtttcaccccagac
ggagcggcactcgtctcggggagtgaagactcgggagtgagcgtatgggaagtatccagg
ctgctagatgataacttgcaaaatgaactgccggtatcttattgcacattcaccgaccac
acactgcccgtcaccgatcttgtctgcggagttggaccgttcccaacatctcggatactc
accagctcagtcgaccatactgtgaagctttgggacttgggtgctcggacactcctcaca
acattccatttcccccaacccatatctcatcttgcttgggagcccaccgagagggttttc
tttgccgcatcatcgggtgacgacgggaccatctatcaaatgaacctattcaagcagacg
agggcagggaagaacgccattgtcgaagcgatcggcggcggaggtgcgacagacatagta
aggataggcgacgatgacggcagcgcgcctaagaagatgtccatacaggtcgaccaacca
ataaccgccctctgcatctccctcacgtcgagtctcctcgtcgtcggtacctccctcggc
acgatccaaacatacgacatcccctcgcatcaacccctacgctccataaatacccacaag
ggcctcgccatcacccacctgagcacgatgatacggccgcccgacctggtcgggcatgtc
aacatccagcttggcttgagtagcggcgttggcgtgagcggcgcggcagggcagggcgag
gtgatcagcctgaggtctgttgtgccgttcgatcggacgagggatccgaggaagagggaa
gctcgggaggttgggataatcctcccagtacagggcgatgttccctatattgacccagca
gaataccccgaagacgagttattccgggaccatgcatattttacgcaacagatggtgcct
gctgcgagtggtgccaacggcgtcggtgccgtctcgttacagtcgcgcgtcgcagagctt
gagacggaggtgcagaagctaagggatcagcttgggaaagcaaaaaatgtgaacgacgtc
atgtgggagacggtggtcaagaaggttattaaggaagggaaagggggtggggacgcggat
gcgtcggaggagccaaagcgcaagagaggccgcacttga

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