Gloeophyllum trabeum: GLOTRDRAFT_139248
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Entry
GLOTRDRAFT_139248 CDS
T03130
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GLOTRDRAFT_139248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtr03009
]
GLOTRDRAFT_139248
Ribosome biogenesis [BR:
gtr03009
]
Eukaryotic type
Pre-60S particles
GTPases
GLOTRDRAFT_139248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
MMR_HSR1
GTP_EFTU_D2
Septin
Motif
Other DBs
NCBI-GeneID:
19304201
NCBI-ProteinID:
XP_007866996
JGI:
Glotr1_1_139248
UniProt:
S7Q5H3
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MSTSKAEDVRCVTCCGHVDHGKTTVMDALLAANNIISQRMAGKLRYLDSREDEQERGITM
ESSAVSLKFQVKEGGSSLRTYIINMIDTPGHVDFSSEVSTASRLVDGALVLVDAVEGVCT
QTIAVLRQAWQDRLKPILVINKIDRLITELKLAPVEAYHHLAQLIEQVNAVMGGFFASER
MEDDLRWREERERRLASKKEAHAAEADAIVNEGEEFQEKDDEDIYFAPERGNVIFASAID
GWGFRVGKFAQLFAAKLGIKEGNLRRVLWGDFYLDPKTKRVISHKHLRGRALKPLFVQFV
LENLWAVYDAVSLNPNPEKVNKIVTSLNLKIPPRDLKSKDARQLLSQILTQWLPLSTGII
QAVIDVVPPPSESQRLRIPKMLYPDLHEATVAPKSKLEENLYACDARERAAVVAYVSKMF
VLPDRELPENKARPLTAEEMRARARQAREARERAGQPAEANGTPIEANGNGSGEEKKGTE
AMQEPGPGNVEDDGEAVLGFARLYSGVIKRGKDVRCVLPKYDNALGPSHPRNRKRVLEAH
VEGLYLIMGRELVPVESVRAGNVFAIRGLEGKVWRSATICAPGEGETDVDGCLVNLGAVY
QNAAPIVRIAVEPESPADMPKLVRGLKLLSQADPCVETFQQQTGEHVILGAGELHLERCL
RDLKDRFAGVAIHGSAPIVPFRETAVKGVDMPPPKFAPAKRGTIKGATIHNLVKFTIRAA
PLPKPLHDFILDNLMILKRIQRERKSQGEEEAEEEEEVGLQDEVYRKPTVKPENFWTSLK
EECVKVGGEWADVADRIWAFGPQGAGACILVDTRWPVSPNSLRRRMDRLRAGEDKEVQSA
AEQSMRDLEGHVETGFQFATFQGPLCAEPVEGLAYFLESFEVDENRIEEEKQHNRIAQVT
GSLISAVREACRNGLLDWSPRLMLAMYTCDIQASTEVLGKVYGVVARRRGRIVSEEMKEG
TSFFSIRALLPVVESFGFADDIRKRTSGAASPQLIFSGYELLDQDPFWVPTTEEELEDLG
DKADRSNVAKTYMDAVRERKGMFVDRKIVEFAEKQRTLKR
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttcaaaagccgaggacgtccgctgcgtcacctgctgcggccatgtcgaccat
ggcaagaccacagtcatggacgcgctcctcgctgcgaacaacatcatctcgcaaagaatg
gccggaaagctgcgctacctggacagtcgagaggacgagcaggagcgagggattaccatg
gagagtagtgccgtctcgctcaagttccaggtcaaggagggaggaagctcgctgaggacg
tatataatcaatatgatcgatacacctggacatgtagatttctccagtgaggtctctact
gcatcccggcttgtggacggggctcttgtacttgtggatgctgtggagggcgtatgcacg
cagaccatcgccgtcctccgacaggcctggcaagaccgcctcaagcccatcctcgtcatc
aacaaaattgaccggctcatcaccgagctcaagcttgcgcccgtcgaggcctaccaccac
ctcgcgcagctcattgagcaggtcaacgccgtcatgggcggcttcttcgcctcggagcgc
atggaggacgacctgcgctggcgcgaggagcgcgagcggcggctcgcgtccaagaaggag
gcgcacgcggcggaggcggacgcgatagtcaacgagggcgaggagttccaggagaaggac
gacgaggacatctatttcgcgccagagaggggcaatgtgatctttgcgagcgccattgac
gggtgggggttccgtgtgggcaagttcgcgcagttgttcgcggcgaagctggggatcaag
gaggggaatttgaggagggtgctttggggcgatttttatttggaccccaagacgaagcgc
gtcatcagtcataaacatctgcgcgggcgggcactgaagccgctgttcgtgcagtttgtg
ctggagaatctgtgggccgtgtacgatgccgtgtcgctcaacccgaacccagaaaaggtg
aataagatcgtcacatcgctcaacctcaaaatcccgccccgcgacctcaagtcgaaagac
gcgcgacagctgctctcgcagatcctcacgcaatggctgccgctttccacgggtatcatc
caggcggtcatcgacgtcgtcccgccgccctccgagtcgcagcgcttgcgcatccccaag
atgctctacccggacctgcacgaggcgaccgtcgcgcctaagtcaaagttggaggagaat
ctgtacgcgtgcgatgcgcgggagagggcggcggtggttgcgtatgtgagcaagatgttc
gtcttgccggatcgggagctgcctgagaataaggcgcggcccttgacggcggaggagatg
agggcgcgcgcgaggcaggcgcgggaggcgagggagagggcggggcagccggcggaggcg
aacggtacccctatcgaggcgaatgggaacggtagtggggaggagaagaaggggacggag
gcgatgcaggaaccggggccggggaatgtagaggacgatggggaggcggtgttgggtttt
gcgcggctttattcgggggttatcaagcgcggtaaggatgtgaggtgtgtcttgccgaag
tacgataatgccctgggcccctcccatccaaggaatcggaagagagtgttggaggcgcac
gtggaggggctttacttgattatggggagggagctggtcccggtggagagcgtgagggcg
gggaacgtgtttgccatccggggactcgaggggaaggtgtggaggagcgcgacgatatgt
gcgcctggagagggagaaacggatgtcgacgggtgtttggtgaaccttggggcggtatac
caaaacgccgcgccgattgtgagaatagcggtggagccggagtcgcctgcggatatgccg
aaattggtgcgcgggttgaagctgctaagccaggcggacccctgcgtggagacgttccag
cagcagacaggcgagcacgttatcttgggcgcgggcgagctgcatttggagaggtgcttg
cgggatctgaaggatcggttcgcgggtgttgcgatacacgggtcggcgccgatcgtgcct
ttcagagagacggcggtgaagggcgtggacatgccaccgcccaagttcgccccggcgaag
cggggcacgatcaaaggcgcaacaatccacaatctcgtgaagtttacgatacgcgcggcc
ccgctgccgaagccgctgcacgatttcattctggacaatctcatgatcctgaagcgcata
cagcgcgagcgtaagtcgcaaggggaggaggaggcggaggaagaggaggaagtggggctg
caggacgaggtgtataggaagccgacggtgaagccggagaatttttggacaagtttgaag
gaggagtgtgtgaaggtggggggcgagtgggcggatgtcgcggacaggatatgggcgttt
gggccgcagggcgcgggggcgtgcatcctcgtggatacgaggtggccggtcagtccgaat
tcgttgcgtaggaggatggacaggttgagggcgggtgaggataaggaagtgcagagtgca
gcggagcagtcgatgcgagacttggagggacatgtcgagactgggttccagtttgcgacg
ttccaagggccactgtgcgcggagccggttgaaggtctcgcctacttcctggaaagtttc
gaggtggatgagaaccggatcgaagaagaaaaacagcataacaggattgcacaagttact
gggtcgttgatctctgctgtgagggaggcgtgtagaaatggtctgctggactggtcaccc
cgtctgatgctcgcaatgtatacatgcgacatccaagcttctactgaggtgctgggcaag
gtgtacggcgttgtggctcgccgacgagggcgtattgtatctgaagaaatgaaggaaggc
acgtcattcttcagcataagagcgctgctacctgtcgtggagagttttgggttcgcagac
gatatccggaaacggacttccggagctgccagtcctcaactgatctttagcggctacgag
ttgttggatcaggatccgttctgggtacccacgactgaggaggagctcgaggatctcggt
gacaaggctgaccggtcgaatgtggcaaagacctacatggatgcggtgcgagaacgcaag
gggatgtttgtggacagaaaaattgtcgagtttgcggagaaacagaggacgctcaaacga
taa
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